HL_5TZS_010
3D structure
- PDB id
- 5TZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Architecture of the yeast small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- AAUGUAAAUACCU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5TZS_010 not in the Motif Atlas
- Homologous match to HL_4V88_199
- Geometric discrepancy: 0.0004
- The information below is about HL_4V88_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.1
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5TZS|1|1|A|520
5TZS|1|1|A|521
5TZS|1|1|U|522
5TZS|1|1|G|523
5TZS|1|1|U|524
5TZS|1|1|A|525
5TZS|1|1|A|526
5TZS|1|1|A|527
5TZS|1|1|U|528
5TZS|1|1|A|529
5TZS|1|1|C|530
5TZS|1|1|C|531
5TZS|1|1|U|532
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain 9
- rpS9_uS4
- Chain F
- rpS24_eS24
- Chain i
- Bms1,Ribosome biogenesis protein BMS1,Bms1
Coloring options: