HL_5TZS_012

3D structure

PDB id

5TZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Architecture of the yeast small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.1 Å

Loop

Sequence

GCCAGCGGAAAC

Length

12 nucleotides

Bulged bases

5TZS|1|1|G|1523

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TZS|1|1|G|1480
5TZS|1|1|C|1481
5TZS|1|1|C|1482
5TZS|1|1|A|1483
5TZS|1|1|G|1484
5TZS|1|1|C|1485
5TZS|1|1|G|1486
5TZS|1|1|G|1523
5TZS|1|1|A|1524
5TZS|1|1|A|1525
5TZS|1|1|A|1526
5TZS|1|1|C|1527

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain 0

5' external transcribed spacer

Chain 6

rpS5_US7

Chain C

rpS16_uS9

Chain m

Imp4

Chain n

Utp30