HL_5TZS_013

3D structure

PDB id

5TZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Architecture of the yeast small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.1 Å

Loop

Sequence

AAGU

Length

4 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5TZS_013 not in the Motif Atlas

Geometric match to HL_5XUZ_001

Geometric discrepancy: 0.1621

The information below is about HL_5XUZ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

5TZS|1|1|A|1592
5TZS|1|1|A|1593
5TZS|1|1|G|1594
5TZS|1|1|U|1604

Current chains

Chain 1

18S ribosomal RNA

Nearby chains

Chain i

Bms1,Ribosome biogenesis protein BMS1,Bms1

Chain m

Imp4