HL_5U07_001

3D structure

PDB id

5U07 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRISPR RNA-guided surveillance complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGCACG

Length

6 nucleotides

Bulged bases

5U07|1|K|C|53

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5U07_001 not in the Motif Atlas

Geometric match to HL_4U7U_001

Geometric discrepancy: 0.1742

The information below is about HL_4U7U_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

5U07|1|K|C|51
5U07|1|K|G|52
5U07|1|K|C|53
5U07|1|K|A|54
5U07|1|K|C|55
5U07|1|K|G|56

Current chains

Chain K

crRNA

Nearby chains

Chain A

CRISPR-associated protein, Cse3 family