HL_5U4J_001
3D structure
- PDB id
- 5U4J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- G(PSU)AACUA(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 5U4J|1|A|A|1913
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5U4J_001 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.1967
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
5U4J|1|A|G|1910
5U4J|1|A|PSU|1911
5U4J|1|A|A|1912
5U4J|1|A|A|1913
5U4J|1|A|C|1914
5U4J|1|A|U|1915
5U4J|1|A|A|1916
5U4J|1|A|PSU|1917
5U4J|1|A|A|1918
5U4J|1|A|A|1919
5U4J|1|A|C|1920
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Peptide chain release factor 2
- Chain w
- Alternative ribosome-rescue factor A
Coloring options: