HL_5U9F_024
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UCAUCCCGA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5U9F_024 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2609
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
5U9F|1|01|U|884
5U9F|1|01|C|885
5U9F|1|01|A|886
5U9F|1|01|U|887
5U9F|1|01|C|888
5U9F|1|01|C|889
5U9F|1|01|C|890
5U9F|1|01|G|891
5U9F|1|01|A|892
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain M
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S19
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