HL_5U9F_108
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAG
- Length
- 4 nucleotides
- Bulged bases
- 5U9F|1|01|U|546, 5U9F|1|01|A|547
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5U9F_108 not in the Motif Atlas
- Geometric match to HL_4V88_198
- Geometric discrepancy: 0.3797
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
5U9F|1|01|U|545
5U9F|1|01|U|546
5U9F|1|01|A|547
5U9F|1|01|G|548
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 12
- 50S ribosomal protein L13
- Chain 20
- 50S ribosomal protein L21
Coloring options: