HL_5UYN_037

3D structure

PDB id

5UYN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5UYN_037 not in the Motif Atlas

Homologous match to HL_5J7L_171

Geometric discrepancy: 0.5445

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

5UYN|1|01|C|1533
5UYN|1|01|U|1534
5UYN|1|01|A|1535
5UYN|1|01|C|1536
5UYN|1|01|G|1537
5UYN|1|01|G|1538

Current chains

Chain 01

23S ribosomal RNA

Nearby chains