HL_5UYN_114
3D structure
- PDB id
- 5UYN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 5UYN|1|A|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UYN_114 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2593
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5UYN|1|A|C|962
5UYN|1|A|G|963
5UYN|1|A|A|964
5UYN|1|A|U|965
5UYN|1|A|G|966
5UYN|1|A|C|967
5UYN|1|A|A|968
5UYN|1|A|A|969
5UYN|1|A|C|970
5UYN|1|A|G|971
5UYN|1|A|C|972
5UYN|1|A|G|973
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14
- Chain W
- Transfer RNA; tRNA
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