HL_5UZ4_012
3D structure
- PDB id
- 5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- AAAGUUAAUACCUUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UZ4_012 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.354
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27483.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
5UZ4|1|A|A|459
5UZ4|1|A|A|460
5UZ4|1|A|A|461
5UZ4|1|A|G|462
5UZ4|1|A|U|463
5UZ4|1|A|U|464
5UZ4|1|A|A|465
5UZ4|1|A|A|466
5UZ4|1|A|U|467
5UZ4|1|A|A|468
5UZ4|1|A|C|469
5UZ4|1|A|C|470
5UZ4|1|A|U|471
5UZ4|1|A|U|472
5UZ4|1|A|U|473
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
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