HL_5UZ4_030

3D structure

PDB id

5UZ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GUGGAUCAGAAUGCCAC

Length

17 nucleotides

Bulged bases

5UZ4|1|A|A|1362, 5UZ4|1|A|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UZ4|1|A|G|1353
5UZ4|1|A|U|1354
5UZ4|1|A|G|1355
5UZ4|1|A|G|1356
5UZ4|1|A|A|1357
5UZ4|1|A|U|1358
5UZ4|1|A|C|1359
5UZ4|1|A|A|1360
5UZ4|1|A|G|1361
5UZ4|1|A|A|1362
5UZ4|1|A|A|1363
5UZ4|1|A|U|1364
5UZ4|1|A|G|1365
5UZ4|1|A|C|1366
5UZ4|1|A|C|1367
5UZ4|1|A|A|1368
5UZ4|1|A|C|1369

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14