HL_5V7Q_009

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGCUACCCGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5V7Q_009 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.32

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

5V7Q|1|A|C|337
5V7Q|1|A|G|338
5V7Q|1|A|C|339
5V7Q|1|A|U|340
5V7Q|1|A|A|341
5V7Q|1|A|C|342
5V7Q|1|A|C|343
5V7Q|1|A|C|344
5V7Q|1|A|G|345
5V7Q|1|A|G|346

Current chains

Chain A

23S rRNA

Nearby chains