HL_5V7Q_060

3D structure

PDB id

5V7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCAAGAGUCCAUAUCGACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V7Q|1|A|C|2704
5V7Q|1|A|C|2705
5V7Q|1|A|A|2706
5V7Q|1|A|A|2707
5V7Q|1|A|G|2708
5V7Q|1|A|A|2709
5V7Q|1|A|G|2710
5V7Q|1|A|U|2711
5V7Q|1|A|C|2712
5V7Q|1|A|C|2713
5V7Q|1|A|A|2714
5V7Q|1|A|U|2715
5V7Q|1|A|A|2716
5V7Q|1|A|U|2717
5V7Q|1|A|C|2718
5V7Q|1|A|G|2719
5V7Q|1|A|A|2720
5V7Q|1|A|C|2721
5V7Q|1|A|G|2722

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain M

50S ribosomal protein L16