HL_5V7Q_079
3D structure
- PDB id
- 5V7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 5V7Q|1|A|G|2767
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5V7Q_079 not in the Motif Atlas
- Homologous match to HL_4WF9_057
- Geometric discrepancy: 0.2201
- The information below is about HL_4WF9_057
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_02262.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 36
Unit IDs
5V7Q|1|A|U|2766
5V7Q|1|A|G|2767
5V7Q|1|A|G|2768
5V7Q|1|A|A|2769
5V7Q|1|A|G|2770
5V7Q|1|A|C|2771
5V7Q|1|A|A|2772
5V7Q|1|A|G|2773
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
Coloring options: