HL_5V93_013
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GGCCCGUGGAAUC
- Length
- 13 nucleotides
- Bulged bases
- 5V93|1|A|G|475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5V93_013 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.2686
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5V93|1|A|G|470
5V93|1|A|G|471
5V93|1|A|C|472
5V93|1|A|C|473
5V93|1|A|C|474
5V93|1|A|G|475
5V93|1|A|U|476
5V93|1|A|G|477
5V93|1|A|G|478
5V93|1|A|A|479
5V93|1|A|A|480
5V93|1|A|U|481
5V93|1|A|C|482
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L28
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