HL_5V93_038

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

5V93|1|A|U|1602

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5V93_038 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2318

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

5V93|1|A|C|1600
5V93|1|A|U|1601
5V93|1|A|U|1602
5V93|1|A|C|1603
5V93|1|A|G|1604
5V93|1|A|G|1605

Current chains

Chain A

23S rRNA

Nearby chains