HL_5VYC_209
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- GGAUAACUGUGGUAAUUCUAGAGCUAAUAC
- Length
- 30 nucleotides
- Bulged bases
- 5VYC|1|i3|U|161, 5VYC|1|i3|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i3|G|145
5VYC|1|i3|G|146
5VYC|1|i3|A|147
5VYC|1|i3|U|148
5VYC|1|i3|A|149
5VYC|1|i3|A|150
5VYC|1|i3|C|151
5VYC|1|i3|U|152
5VYC|1|i3|G|153
5VYC|1|i3|U|154
5VYC|1|i3|G|155
5VYC|1|i3|G|156
5VYC|1|i3|U|157
5VYC|1|i3|A|158
5VYC|1|i3|A|159
5VYC|1|i3|U|160
5VYC|1|i3|U|161
5VYC|1|i3|C|162
5VYC|1|i3|U|163
5VYC|1|i3|A|164
5VYC|1|i3|G|165
5VYC|1|i3|A|166
5VYC|1|i3|G|167
5VYC|1|i3|C|168
5VYC|1|i3|U|169
5VYC|1|i3|A|170
5VYC|1|i3|A|171
5VYC|1|i3|U|172
5VYC|1|i3|A|173
5VYC|1|i3|C|174
Current chains
- Chain i3
- Human 18S ribosomal RNA
Nearby chains
- Chain G3
- 40S ribosomal protein S6
- Chain Y3
- 40S ribosomal protein S24
- Chain i4
- Small subunit ribosomal RNA; SSU rRNA
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