5VYC Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5VYC_001 | 1/i1/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_002 | 1/i1/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_199 | 1/i1/145:174 | No text annotation | ||
| HL_5VYC_003 | 1/i1/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_004 | 1/i1/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_005 | 1/i1/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_006 | 1/i1/321:330 | No text annotation | ||
| HL_5VYC_007 | 1/i1/377:387 | No text annotation | ||
| HL_5VYC_008 | 1/i1/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_009 | 1/i1/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_010 | 1/i1/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_011 | 1/i1/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_012 | 1/i1/534:550 | No text annotation | ||
| HL_5VYC_013 | 1/i1/566:584 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_5VYC_014 | 1/i1/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_015 | 1/i1/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_016 | 1/i1/833:841 | No text annotation | ||
| HL_5VYC_017 | 1/i1/874:911 | No text annotation | ||
| HL_5VYC_202 | 1/i1/952:974 | No text annotation | ||
| HL_5VYC_018 | 1/i1/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_019 | 1/i1/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_229 | 1/i1/1054:1064 | No text annotation | homologous HL_8CRE_212 HL_38491.2 | |
| HL_5VYC_021 | 1/i1/1112:1121 | No text annotation | ||
| HL_5VYC_022 | 1/i1/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_023 | 1/i1/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_024 | 1/i1/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_025 | 1/i1/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_026 | 1/i1/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_203 | 1/i1/1395:1450 | No text annotation | ||
| HL_5VYC_027 | 1/i1/1411:1434 | No text annotation | ||
| HL_5VYC_028 | 1/i1/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_029 | 1/i1/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_030 | 1/i1/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_031 | 1/i1/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_033 | 1/i1/1847:1852 | GNRA variation | homologous HL_4V88_222 NA | |
| HL_5VYC_034 | 1/i2/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_035 | 1/i2/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_204 | 1/i2/145:174 | No text annotation | ||
| HL_5VYC_036 | 1/i2/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_037 | 1/i2/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_038 | 1/i2/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_039 | 1/i2/321:330 | No text annotation | ||
| HL_5VYC_040 | 1/i2/377:387 | No text annotation | ||
| HL_5VYC_041 | 1/i2/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_042 | 1/i2/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_043 | 1/i2/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_044 | 1/i2/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_045 | 1/i2/534:550 | No text annotation | ||
| HL_5VYC_046 | 1/i2/566:584 | No text annotation | ||
| HL_5VYC_047 | 1/i2/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_048 | 1/i2/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_049 | 1/i2/833:841 | No text annotation | ||
| HL_5VYC_050 | 1/i2/874:911 | No text annotation | ||
| HL_5VYC_207 | 1/i2/952:974 | No text annotation | ||
| HL_5VYC_051 | 1/i2/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_052 | 1/i2/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_230 | 1/i2/1054:1064 | No text annotation | homologous HL_8CRE_212 HL_38491.2 | |
| HL_5VYC_054 | 1/i2/1112:1121 | No text annotation | ||
| HL_5VYC_055 | 1/i2/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_056 | 1/i2/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_057 | 1/i2/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_058 | 1/i2/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_059 | 1/i2/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_208 | 1/i2/1395:1450 | No text annotation | ||
| HL_5VYC_060 | 1/i2/1411:1434 | No text annotation | ||
| HL_5VYC_061 | 1/i2/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_062 | 1/i2/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_063 | 1/i2/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_064 | 1/i2/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_231 | 1/i2/1750:1784 | No text annotation | ||
| HL_5VYC_066 | 1/i2/1847:1852 | GNRA variation | homologous HL_4V88_222 NA | |
| HL_5VYC_067 | 1/i3/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_068 | 1/i3/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_209 | 1/i3/145:174 | No text annotation | ||
| HL_5VYC_069 | 1/i3/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_070 | 1/i3/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_071 | 1/i3/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_072 | 1/i3/321:330 | No text annotation | ||
| HL_5VYC_073 | 1/i3/377:387 | No text annotation | ||
| HL_5VYC_074 | 1/i3/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_075 | 1/i3/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_076 | 1/i3/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_077 | 1/i3/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_078 | 1/i3/534:550 | No text annotation | ||
| HL_5VYC_079 | 1/i3/566:584 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_5VYC_080 | 1/i3/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_081 | 1/i3/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_082 | 1/i3/833:841 | No text annotation | ||
| HL_5VYC_083 | 1/i3/874:911 | No text annotation | ||
| HL_5VYC_212 | 1/i3/952:974 | No text annotation | ||
| HL_5VYC_084 | 1/i3/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_085 | 1/i3/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_232 | 1/i3/1054:1064 | No text annotation | homologous HL_8P9A_211 HL_38491.2 | |
| HL_5VYC_087 | 1/i3/1112:1121 | No text annotation | ||
| HL_5VYC_088 | 1/i3/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_089 | 1/i3/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_090 | 1/i3/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_091 | 1/i3/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_092 | 1/i3/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_213 | 1/i3/1395:1450 | No text annotation | ||
| HL_5VYC_093 | 1/i3/1411:1434 | No text annotation | ||
| HL_5VYC_094 | 1/i3/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_095 | 1/i3/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_096 | 1/i3/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_097 | 1/i3/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_099 | 1/i3/1847:1852 | GNRA variation | homologous HL_4V88_222 NA | |
| HL_5VYC_100 | 1/i4/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_101 | 1/i4/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_214 | 1/i4/145:174 | No text annotation | ||
| HL_5VYC_102 | 1/i4/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_103 | 1/i4/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_104 | 1/i4/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_105 | 1/i4/321:330 | No text annotation | ||
| HL_5VYC_106 | 1/i4/377:387 | No text annotation | ||
| HL_5VYC_107 | 1/i4/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_108 | 1/i4/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_109 | 1/i4/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_110 | 1/i4/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_111 | 1/i4/534:550 | No text annotation | ||
| HL_5VYC_112 | 1/i4/566:584 | No text annotation | ||
| HL_5VYC_113 | 1/i4/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_114 | 1/i4/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_115 | 1/i4/833:841 | No text annotation | ||
| HL_5VYC_116 | 1/i4/874:911 | No text annotation | ||
| HL_5VYC_217 | 1/i4/952:974 | No text annotation | ||
| HL_5VYC_117 | 1/i4/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_118 | 1/i4/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_233 | 1/i4/1054:1064 | No text annotation | homologous HL_8P9A_211 HL_38491.2 | |
| HL_5VYC_120 | 1/i4/1112:1121 | No text annotation | ||
| HL_5VYC_121 | 1/i4/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_122 | 1/i4/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_123 | 1/i4/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_124 | 1/i4/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_125 | 1/i4/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_218 | 1/i4/1395:1450 | No text annotation | ||
| HL_5VYC_126 | 1/i4/1411:1434 | No text annotation | ||
| HL_5VYC_127 | 1/i4/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_128 | 1/i4/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_129 | 1/i4/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_130 | 1/i4/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_132 | 1/i4/1847:1852 | GNRA variation | homologous HL_4V88_222 NA | |
| HL_5VYC_133 | 1/i5/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_134 | 1/i5/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_219 | 1/i5/145:174 | No text annotation | ||
| HL_5VYC_135 | 1/i5/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_136 | 1/i5/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_137 | 1/i5/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_138 | 1/i5/321:330 | No text annotation | ||
| HL_5VYC_139 | 1/i5/377:387 | No text annotation | ||
| HL_5VYC_140 | 1/i5/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_141 | 1/i5/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_142 | 1/i5/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_143 | 1/i5/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_144 | 1/i5/534:550 | No text annotation | ||
| HL_5VYC_145 | 1/i5/566:584 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_5VYC_146 | 1/i5/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_147 | 1/i5/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_148 | 1/i5/833:841 | No text annotation | ||
| HL_5VYC_149 | 1/i5/874:911 | No text annotation | ||
| HL_5VYC_222 | 1/i5/952:974 | No text annotation | ||
| HL_5VYC_150 | 1/i5/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_151 | 1/i5/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_234 | 1/i5/1054:1064 | No text annotation | homologous HL_8P9A_211 HL_38491.2 | |
| HL_5VYC_153 | 1/i5/1112:1121 | No text annotation | ||
| HL_5VYC_154 | 1/i5/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_155 | 1/i5/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_156 | 1/i5/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_157 | 1/i5/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_158 | 1/i5/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_223 | 1/i5/1395:1450 | No text annotation | ||
| HL_5VYC_159 | 1/i5/1411:1434 | No text annotation | ||
| HL_5VYC_160 | 1/i5/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_161 | 1/i5/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_162 | 1/i5/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_163 | 1/i5/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_165 | 1/i5/1847:1852 | GNRA variation | homologous HL_4V88_222 NA | |
| HL_5VYC_166 | 1/i6/7:17 | No text annotation | homologous HL_4V88_186 NA | |
| HL_5VYC_167 | 1/i6/69:80 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_5VYC_224 | 1/i6/145:174 | No text annotation | ||
| HL_5VYC_168 | 1/i6/156:162 | GNRA related | homologous HL_4V88_188 NA | |
| HL_5VYC_169 | 1/i6/195:204 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_5VYC_170 | 1/i6/288:295 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_5VYC_171 | 1/i6/321:330 | No text annotation | ||
| HL_5VYC_172 | 1/i6/377:387 | No text annotation | ||
| HL_5VYC_173 | 1/i6/416:421 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_5VYC_174 | 1/i6/441:452 | No text annotation | homologous HL_4V88_195 NA | |
| HL_5VYC_175 | 1/i6/462:467 | UNCG | homologous HL_4V88_196 NA | |
| HL_5VYC_176 | 1/i6/498:504 | No text annotation | homologous HL_4V88_197 NA | |
| HL_5VYC_177 | 1/i6/534:550 | No text annotation | ||
| HL_5VYC_178 | 1/i6/566:584 | No text annotation | ||
| HL_5VYC_179 | 1/i6/618:623 | GNRA variation | homologous HL_4V88_200 NA | |
| HL_5VYC_180 | 1/i6/820:828 | No text annotation | homologous HL_4V88_203 NA | |
| HL_5VYC_181 | 1/i6/833:841 | No text annotation | ||
| HL_5VYC_182 | 1/i6/874:911 | No text annotation | ||
| HL_5VYC_227 | 1/i6/952:974 | No text annotation | ||
| HL_5VYC_183 | 1/i6/957:966 | No text annotation | homologous HL_4V88_206 NA | |
| HL_5VYC_184 | 1/i6/994:999 | GNRA | homologous HL_4V88_207 NA | |
| HL_5VYC_235 | 1/i6/1054:1064 | No text annotation | homologous HL_8P9A_211 HL_38491.2 | |
| HL_5VYC_186 | 1/i6/1112:1121 | No text annotation | ||
| HL_5VYC_187 | 1/i6/1141:1146 | GNRA | homologous HL_4V88_210 NA | |
| HL_5VYC_188 | 1/i6/1178:1183 | GNRA | homologous HL_4V88_211 NA | |
| HL_5VYC_189 | 1/i6/1245:1254 | No text annotation | homologous HL_4V88_212 NA | |
| HL_5VYC_190 | 1/i6/1353:1358 | GNRA | homologous HL_4V88_214 NA | |
| HL_5VYC_191 | 1/i6/1366:1373 | No text annotation | homologous HL_4V88_215 NA | |
| HL_5VYC_228 | 1/i6/1395:1450 | No text annotation | ||
| HL_5VYC_192 | 1/i6/1411:1434 | No text annotation | ||
| HL_5VYC_193 | 1/i6/1460:1466 | GNRA | homologous HL_4V88_217 NA | |
| HL_5VYC_194 | 1/i6/1565:1570 | GNRA | homologous HL_4V88_218 NA | |
| HL_5VYC_195 | 1/i6/1614:1625 | No text annotation | homologous HL_4V88_219 NA | |
| HL_5VYC_196 | 1/i6/1658:1666 | No text annotation | homologous HL_4V88_220 NA | |
| HL_5VYC_198 | 1/i6/1847:1852 | GNRA variation | homologous HL_4V88_222 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_5VYC_200 | No text annotation | ||
| HL_5VYC_201 | No text annotation | ||
| HL_5VYC_020 | tRNA D-loop | ||
| HL_5VYC_032 | No text annotation | ||
| HL_5VYC_205 | No text annotation | ||
| HL_5VYC_206 | No text annotation | ||
| HL_5VYC_053 | tRNA D-loop | ||
| HL_5VYC_065 | No text annotation | ||
| HL_5VYC_210 | No text annotation | ||
| HL_5VYC_211 | No text annotation | ||
| HL_5VYC_086 | tRNA D-loop | ||
| HL_5VYC_098 | No text annotation | ||
| HL_5VYC_215 | No text annotation | ||
| HL_5VYC_216 | No text annotation | ||
| HL_5VYC_119 | tRNA D-loop | ||
| HL_5VYC_131 | No text annotation | ||
| HL_5VYC_220 | No text annotation | ||
| HL_5VYC_221 | No text annotation | ||
| HL_5VYC_152 | tRNA D-loop | ||
| HL_5VYC_164 | No text annotation | ||
| HL_5VYC_225 | No text annotation | ||
| HL_5VYC_226 | No text annotation | ||
| HL_5VYC_185 | tRNA D-loop | ||
| HL_5VYC_197 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5VYC_001 | 1/i1/23:25, 1/i1/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_002 | 1/i1/34:36, 1/i1/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_003 | 1/i1/37:40, 1/i1/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_004 | 1/i1/41:47, 1/i1/479:481 | No text annotation | homologous IL_4V88_387 NA | |
| IL_5VYC_005 | 1/i1/49:51, 1/i1/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_006 | 1/i1/57:62, 1/i1/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_417 | 1/i1/63:68, 1/i1/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_008 | 1/i1/108:110, 1/i1/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_009 | 1/i1/110:112, 1/i1/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_010 | 1/i1/112:115, 1/i1/348:349 | Multiple bulged bases | homologous IL_4V88_392 NA | |
| IL_5VYC_011 | 1/i1/116:121, 1/i1/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_012 | 1/i1/145:151, 1/i1/167:174 | tWH-tWH-tHW-tHW | geometric IL_4V88_394 NA | |
| IL_5VYC_013 | 1/i1/151:154, 1/i1/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_014 | 1/i1/188:192, 1/i1/207:211 | No text annotation | ||
| IL_5VYC_016 | 1/i1/316:321, 1/i1/330:334 | No text annotation | ||
| IL_5VYC_017 | 1/i1/359:364, 1/i1/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_018 | 1/i1/366:371, 1/i1/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_019 | 1/i1/411:413, 1/i1/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_494 | 1/i1/437:439, 1/i1/454:456 | Isolated cWH basepair | homologous IL_8CRE_411 IL_10892.2 | |
| IL_5VYC_495 | 1/i1/487:489, 1/i1/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_021 | 1/i1/491:495, 1/i1/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_022 | 1/i1/495:496, 1/i1/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_023 | 1/i1/599:608, 1/i1/635:637 | No text annotation | ||
| IL_5VYC_496 | 1/i1/611:617, 1/i1/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_025 | 1/i1/663:665, 1/i1/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_026 | 1/i1/665:671, 1/i1/1161:1162 | No text annotation | geometric IL_4V88_416 NA | |
| IL_5VYC_418 | 1/i1/673:675, 1/i1/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_028 | 1/i1/676:680, 1/i1/1025:1029 | tSH-tHW-tHS | homologous IL_4V88_418 NA | |
| IL_5VYC_497 | 1/i1/802:803, 1/i1/860:863 | No text annotation | homologous IL_8CRE_428 IL_73108.2 | |
| IL_5VYC_029 | 1/i1/805:807, 1/i1/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_419 | 1/i1/805:816, 1/i1/848:858 | No text annotation | ||
| IL_5VYC_030 | 1/i1/807:816, 1/i1/848:856 | No text annotation | ||
| IL_5VYC_031 | 1/i1/922:923, 1/i1/1019:1022 | Major groove platform; stack outside cWW | homologous IL_4V88_428 NA | |
| IL_5VYC_420 | 1/i1/925:926, 1/i1/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_421 | 1/i1/928:931, 1/i1/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_034 | 1/i1/931:935, 1/i1/1007:1010 | Tandem non-canonical cWW pairs | homologous IL_4V88_431 NA | |
| IL_5VYC_498 | 1/i1/942:945, 1/i1/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_036 | 1/i1/952:956, 1/i1/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_037 | 1/i1/1042:1047, 1/i1/1071:1073 | Other IL | geometric IL_4V88_435 NA | |
| IL_5VYC_422 | 1/i1/1042:1051, 1/i1/1067:1073 | No text annotation | ||
| IL_5VYC_038 | 1/i1/1047:1051, 1/i1/1067:1071 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_5VYC_039 | 1/i1/1091:1093, 1/i1/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_040 | 1/i1/1098:1101, 1/i1/1131:1134 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_5VYC_041 | 1/i1/1101:1103, 1/i1/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_042 | 1/i1/1108:1110, 1/i1/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_043 | 1/i1/1168:1175, 1/i1/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_044 | 1/i1/1203:1205, 1/i1/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_045 | 1/i1/1206:1208, 1/i1/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_046 | 1/i1/1214:1217, 1/i1/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_047 | 1/i1/1230:1232, 1/i1/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_048 | 1/i1/1235:1236, 1/i1/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_049 | 1/i1/1270:1272, 1/i1/1510:1512 | Isolated non-canonical cWW pair | geometric IL_4M4O_002 IL_01003.3 | |
| IL_5VYC_050 | 1/i1/1272:1324, 1/i1/1504:1510 | No text annotation | ||
| IL_5VYC_051 | 1/i1/1325:1327, 1/i1/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_052 | 1/i1/1329:1333, 1/i1/1498:1500 | Isolated non-canonical cWW pair | geometric IL_5ZTM_001 IL_01003.3 | |
| IL_5VYC_424 | 1/i1/1329:1335, 1/i1/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_053 | 1/i1/1333:1335, 1/i1/1492:1498 | Minor groove platform with extra cWW | homologous IL_4V88_451 NA | |
| IL_5VYC_054 | 1/i1/1336:1338, 1/i1/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_055 | 1/i1/1347:1349, 1/i1/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_056 | 1/i1/1363:1365, 1/i1/1374:1375 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_5VYC_057 | 1/i1/1536:1539, 1/i1/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_425 | 1/i1/1541:1559, 1/i1/1576:1592 | No text annotation | ||
| IL_5VYC_058 | 1/i1/1560:1562, 1/i1/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_059 | 1/i1/1604:1610, 1/i1/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_060 | 1/i1/1700:1702, 1/i1/1833:1836 | No text annotation | homologous IL_4V88_463 NA | |
| IL_5VYC_426 | 1/i1/1700:1705, 1/i1/1829:1836 | No text annotation | ||
| IL_5VYC_061 | 1/i1/1702:1705, 1/i1/1829:1833 | No text annotation | geometric IL_4V88_464 NA | |
| IL_5VYC_062 | 1/i1/1706:1708, 1/i1/1826:1828 | Isolated non-canonical cWW pair | homologous IL_4V88_465 NA | |
| IL_5VYC_427 | 1/i1/1708:1711, 1/i1/1822:1826 | No text annotation | ||
| IL_5VYC_064 | 1/i1/1713:1716, 1/i1/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_065 | 1/i1/1717:1720, 1/i1/1813:1816 | Double sheared | homologous IL_4V88_468 NA | |
| IL_5VYC_066 | 1/i1/1720:1723, 1/i1/1811:1813 | No text annotation | ||
| IL_5VYC_428 | 1/i1/1729:1731, 1/i1/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_068 | 1/i1/1733:1736, 1/i1/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_069 | 1/i1/1739:1741, 1/i1/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_070 | 1/i1/1742:1746, 1/i1/1788:1792 | Triple sheared | homologous IL_4V88_474 NA | |
| IL_5VYC_071 | 1/i2/23:25, 1/i2/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_072 | 1/i2/34:36, 1/i2/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_073 | 1/i2/37:40, 1/i2/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_074 | 1/i2/41:47, 1/i2/479:481 | No text annotation | geometric IL_4V88_387 NA | |
| IL_5VYC_075 | 1/i2/49:51, 1/i2/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_076 | 1/i2/57:62, 1/i2/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_430 | 1/i2/63:68, 1/i2/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_078 | 1/i2/108:110, 1/i2/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_079 | 1/i2/110:112, 1/i2/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_080 | 1/i2/112:115, 1/i2/348:349 | Multiple bulged bases | homologous IL_4V88_392 NA | |
| IL_5VYC_081 | 1/i2/116:121, 1/i2/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_082 | 1/i2/145:151, 1/i2/167:174 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_5VYC_083 | 1/i2/151:154, 1/i2/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_085 | 1/i2/316:319, 1/i2/332:334 | No text annotation | ||
| IL_5VYC_086 | 1/i2/359:364, 1/i2/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_087 | 1/i2/366:371, 1/i2/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_088 | 1/i2/411:413, 1/i2/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_499 | 1/i2/437:439, 1/i2/454:456 | Isolated cWH basepair | homologous IL_8CRE_411 IL_10892.2 | |
| IL_5VYC_500 | 1/i2/487:489, 1/i2/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_090 | 1/i2/491:495, 1/i2/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_091 | 1/i2/495:496, 1/i2/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_092 | 1/i2/599:608, 1/i2/635:637 | No text annotation | ||
| IL_5VYC_501 | 1/i2/611:617, 1/i2/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_094 | 1/i2/663:665, 1/i2/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_095 | 1/i2/665:671, 1/i2/1161:1162 | No text annotation | homologous IL_4V88_416 NA | |
| IL_5VYC_431 | 1/i2/673:675, 1/i2/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_097 | 1/i2/676:680, 1/i2/1025:1029 | tSH-tHW-tHS | homologous IL_4V88_418 NA | |
| IL_5VYC_502 | 1/i2/802:803, 1/i2/860:863 | No text annotation | homologous IL_8CRE_428 IL_73108.2 | |
| IL_5VYC_098 | 1/i2/805:807, 1/i2/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_432 | 1/i2/805:816, 1/i2/848:858 | No text annotation | ||
| IL_5VYC_099 | 1/i2/807:816, 1/i2/848:856 | No text annotation | ||
| IL_5VYC_100 | 1/i2/922:923, 1/i2/1019:1022 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_5VYC_433 | 1/i2/925:926, 1/i2/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_434 | 1/i2/928:931, 1/i2/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_103 | 1/i2/931:935, 1/i2/1007:1010 | Tandem non-canonical cWW pairs | homologous IL_4V88_431 NA | |
| IL_5VYC_503 | 1/i2/942:945, 1/i2/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_105 | 1/i2/952:956, 1/i2/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_106 | 1/i2/1042:1047, 1/i2/1071:1073 | Other IL | geometric IL_4V88_435 NA | |
| IL_5VYC_435 | 1/i2/1042:1051, 1/i2/1067:1073 | No text annotation | ||
| IL_5VYC_107 | 1/i2/1047:1051, 1/i2/1067:1071 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_5VYC_108 | 1/i2/1091:1093, 1/i2/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_109 | 1/i2/1098:1101, 1/i2/1131:1134 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_5VYC_110 | 1/i2/1101:1103, 1/i2/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_111 | 1/i2/1108:1110, 1/i2/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_112 | 1/i2/1168:1175, 1/i2/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_113 | 1/i2/1203:1205, 1/i2/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_114 | 1/i2/1206:1208, 1/i2/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_115 | 1/i2/1214:1217, 1/i2/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_116 | 1/i2/1230:1232, 1/i2/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_117 | 1/i2/1235:1236, 1/i2/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_118 | 1/i2/1270:1272, 1/i2/1510:1512 | Isolated non-canonical cWW pair | homologous IL_4V88_446 NA | |
| IL_5VYC_119 | 1/i2/1272:1324, 1/i2/1504:1510 | No text annotation | ||
| IL_5VYC_120 | 1/i2/1325:1327, 1/i2/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_121 | 1/i2/1329:1333, 1/i2/1498:1500 | Isolated cWS basepair | homologous IL_4V88_450 NA | |
| IL_5VYC_437 | 1/i2/1329:1335, 1/i2/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_122 | 1/i2/1333:1335, 1/i2/1492:1498 | Minor groove platform with extra cWW | geometric IL_4V88_451 NA | |
| IL_5VYC_123 | 1/i2/1336:1338, 1/i2/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_124 | 1/i2/1347:1349, 1/i2/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_125 | 1/i2/1363:1365, 1/i2/1374:1375 | Minor groove platform | homologous IL_4V88_454 NA | |
| IL_5VYC_126 | 1/i2/1536:1539, 1/i2/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_504 | 1/i2/1541:1558, 1/i2/1577:1592 | No text annotation | ||
| IL_5VYC_127 | 1/i2/1560:1562, 1/i2/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_128 | 1/i2/1604:1610, 1/i2/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_129 | 1/i2/1700:1702, 1/i2/1833:1836 | No text annotation | homologous IL_4V88_463 NA | |
| IL_5VYC_439 | 1/i2/1700:1705, 1/i2/1829:1836 | No text annotation | ||
| IL_5VYC_130 | 1/i2/1702:1705, 1/i2/1829:1833 | No text annotation | geometric IL_4V88_464 NA | |
| IL_5VYC_131 | 1/i2/1706:1708, 1/i2/1826:1828 | Isolated non-canonical cWW pair | geometric IL_1U9S_007 IL_01003.3 | |
| IL_5VYC_440 | 1/i2/1708:1711, 1/i2/1822:1826 | No text annotation | ||
| IL_5VYC_133 | 1/i2/1713:1716, 1/i2/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_134 | 1/i2/1717:1720, 1/i2/1813:1816 | Double sheared | homologous IL_4V88_468 NA | |
| IL_5VYC_135 | 1/i2/1720:1723, 1/i2/1811:1813 | No text annotation | ||
| IL_5VYC_441 | 1/i2/1729:1731, 1/i2/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_137 | 1/i2/1733:1736, 1/i2/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_138 | 1/i2/1739:1741, 1/i2/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_139 | 1/i2/1742:1746, 1/i2/1788:1792 | Triple sheared | homologous IL_4V88_474 NA | |
| IL_5VYC_140 | 1/i3/23:25, 1/i3/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_141 | 1/i3/34:36, 1/i3/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_142 | 1/i3/37:40, 1/i3/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_143 | 1/i3/41:47, 1/i3/479:481 | No text annotation | homologous IL_4V88_387 NA | |
| IL_5VYC_144 | 1/i3/49:51, 1/i3/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_145 | 1/i3/57:62, 1/i3/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_443 | 1/i3/63:68, 1/i3/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_147 | 1/i3/108:110, 1/i3/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_148 | 1/i3/110:112, 1/i3/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_149 | 1/i3/112:115, 1/i3/348:349 | Multiple bulged bases | homologous IL_4V88_392 NA | |
| IL_5VYC_150 | 1/i3/116:121, 1/i3/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_151 | 1/i3/145:151, 1/i3/167:174 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_5VYC_152 | 1/i3/151:154, 1/i3/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_154 | 1/i3/316:321, 1/i3/330:334 | No text annotation | ||
| IL_5VYC_155 | 1/i3/359:364, 1/i3/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_156 | 1/i3/366:371, 1/i3/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_157 | 1/i3/411:413, 1/i3/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_505 | 1/i3/437:439, 1/i3/454:456 | Isolated cWH basepair | homologous IL_8P9A_394 IL_10892.2 | |
| IL_5VYC_506 | 1/i3/487:489, 1/i3/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_159 | 1/i3/491:495, 1/i3/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_160 | 1/i3/495:496, 1/i3/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_161 | 1/i3/599:608, 1/i3/635:637 | No text annotation | ||
| IL_5VYC_507 | 1/i3/611:617, 1/i3/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_163 | 1/i3/663:665, 1/i3/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_164 | 1/i3/665:671, 1/i3/1161:1162 | No text annotation | homologous IL_4V88_416 NA | |
| IL_5VYC_444 | 1/i3/673:675, 1/i3/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_166 | 1/i3/676:680, 1/i3/1025:1029 | tSH-tHW-tHS | geometric IL_4V88_418 NA | |
| IL_5VYC_508 | 1/i3/802:803, 1/i3/860:863 | No text annotation | homologous IL_8P9A_412 IL_73108.2 | |
| IL_5VYC_167 | 1/i3/805:807, 1/i3/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_445 | 1/i3/805:816, 1/i3/848:858 | No text annotation | ||
| IL_5VYC_168 | 1/i3/807:816, 1/i3/848:856 | No text annotation | ||
| IL_5VYC_169 | 1/i3/922:923, 1/i3/1019:1022 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_5VYC_446 | 1/i3/925:926, 1/i3/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_447 | 1/i3/928:931, 1/i3/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_172 | 1/i3/931:935, 1/i3/1007:1010 | Tandem non-canonical cWW pairs | homologous IL_4V88_431 NA | |
| IL_5VYC_509 | 1/i3/942:945, 1/i3/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_174 | 1/i3/952:956, 1/i3/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_175 | 1/i3/1042:1047, 1/i3/1071:1073 | Other IL | geometric IL_4V88_435 NA | |
| IL_5VYC_448 | 1/i3/1042:1051, 1/i3/1067:1073 | No text annotation | ||
| IL_5VYC_176 | 1/i3/1047:1051, 1/i3/1067:1071 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_5VYC_177 | 1/i3/1091:1093, 1/i3/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_178 | 1/i3/1098:1101, 1/i3/1131:1134 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_5VYC_179 | 1/i3/1101:1103, 1/i3/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_180 | 1/i3/1108:1110, 1/i3/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_181 | 1/i3/1168:1175, 1/i3/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_182 | 1/i3/1203:1205, 1/i3/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_183 | 1/i3/1206:1208, 1/i3/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_184 | 1/i3/1214:1217, 1/i3/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_185 | 1/i3/1230:1232, 1/i3/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_186 | 1/i3/1235:1236, 1/i3/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_187 | 1/i3/1270:1272, 1/i3/1510:1512 | Isolated non-canonical cWW pair | homologous IL_4V88_446 NA | |
| IL_5VYC_188 | 1/i3/1272:1324, 1/i3/1504:1510 | No text annotation | ||
| IL_5VYC_189 | 1/i3/1325:1327, 1/i3/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_190 | 1/i3/1329:1333, 1/i3/1498:1500 | Isolated cWS basepair | homologous IL_4V88_450 NA | |
| IL_5VYC_450 | 1/i3/1329:1335, 1/i3/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_191 | 1/i3/1333:1335, 1/i3/1492:1498 | Minor groove platform with extra cWW | geometric IL_4V88_451 NA | |
| IL_5VYC_192 | 1/i3/1336:1338, 1/i3/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_193 | 1/i3/1347:1349, 1/i3/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_194 | 1/i3/1363:1365, 1/i3/1374:1375 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_5VYC_195 | 1/i3/1536:1539, 1/i3/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_451 | 1/i3/1541:1559, 1/i3/1576:1592 | No text annotation | ||
| IL_5VYC_196 | 1/i3/1560:1562, 1/i3/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_197 | 1/i3/1604:1610, 1/i3/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_198 | 1/i3/1700:1702, 1/i3/1833:1836 | No text annotation | homologous IL_4V88_463 NA | |
| IL_5VYC_452 | 1/i3/1700:1705, 1/i3/1829:1836 | No text annotation | ||
| IL_5VYC_199 | 1/i3/1702:1705, 1/i3/1829:1833 | No text annotation | geometric IL_4V88_464 NA | |
| IL_5VYC_200 | 1/i3/1706:1708, 1/i3/1826:1828 | Isolated non-canonical cWW pair | homologous IL_4V88_465 NA | |
| IL_5VYC_453 | 1/i3/1708:1711, 1/i3/1822:1826 | No text annotation | ||
| IL_5VYC_202 | 1/i3/1713:1716, 1/i3/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_203 | 1/i3/1717:1720, 1/i3/1813:1816 | Double sheared | homologous IL_4V88_468 NA | |
| IL_5VYC_204 | 1/i3/1720:1723, 1/i3/1811:1813 | No text annotation | ||
| IL_5VYC_454 | 1/i3/1729:1731, 1/i3/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_206 | 1/i3/1733:1736, 1/i3/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_207 | 1/i3/1739:1741, 1/i3/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_208 | 1/i3/1742:1746, 1/i3/1788:1792 | Triple sheared | homologous IL_4V88_474 NA | |
| IL_5VYC_209 | 1/i4/23:25, 1/i4/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_210 | 1/i4/34:36, 1/i4/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_211 | 1/i4/37:40, 1/i4/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_212 | 1/i4/41:47, 1/i4/479:481 | No text annotation | geometric IL_4V88_387 NA | |
| IL_5VYC_213 | 1/i4/49:51, 1/i4/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_214 | 1/i4/57:62, 1/i4/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_456 | 1/i4/63:68, 1/i4/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_216 | 1/i4/108:110, 1/i4/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_217 | 1/i4/110:112, 1/i4/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_218 | 1/i4/112:115, 1/i4/348:349 | Multiple bulged bases | homologous IL_4V88_392 NA | |
| IL_5VYC_219 | 1/i4/116:121, 1/i4/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_220 | 1/i4/145:151, 1/i4/167:174 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_5VYC_221 | 1/i4/151:154, 1/i4/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_223 | 1/i4/359:364, 1/i4/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_224 | 1/i4/366:371, 1/i4/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_225 | 1/i4/411:413, 1/i4/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_510 | 1/i4/437:439, 1/i4/454:456 | Isolated cWH basepair | homologous IL_8P9A_394 IL_10892.2 | |
| IL_5VYC_511 | 1/i4/487:489, 1/i4/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_227 | 1/i4/491:495, 1/i4/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_228 | 1/i4/495:496, 1/i4/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_229 | 1/i4/599:608, 1/i4/635:637 | No text annotation | ||
| IL_5VYC_512 | 1/i4/611:617, 1/i4/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_231 | 1/i4/663:665, 1/i4/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_232 | 1/i4/665:671, 1/i4/1161:1162 | No text annotation | geometric IL_4V88_416 NA | |
| IL_5VYC_457 | 1/i4/673:675, 1/i4/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_234 | 1/i4/676:680, 1/i4/1025:1029 | tSH-tHW-tHS | geometric IL_4V88_418 NA | |
| IL_5VYC_513 | 1/i4/802:803, 1/i4/860:863 | No text annotation | homologous IL_8P9A_412 IL_73108.2 | |
| IL_5VYC_235 | 1/i4/805:807, 1/i4/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_458 | 1/i4/805:816, 1/i4/848:858 | No text annotation | ||
| IL_5VYC_236 | 1/i4/807:816, 1/i4/848:856 | No text annotation | ||
| IL_5VYC_237 | 1/i4/922:923, 1/i4/1019:1022 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_5VYC_459 | 1/i4/925:926, 1/i4/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_460 | 1/i4/928:931, 1/i4/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_240 | 1/i4/931:935, 1/i4/1007:1010 | Tandem non-canonical cWW pairs | geometric IL_4V88_431 NA | |
| IL_5VYC_514 | 1/i4/942:945, 1/i4/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_242 | 1/i4/952:956, 1/i4/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_243 | 1/i4/1042:1047, 1/i4/1071:1073 | Other IL | geometric IL_4V88_435 NA | |
| IL_5VYC_461 | 1/i4/1042:1051, 1/i4/1067:1073 | No text annotation | ||
| IL_5VYC_244 | 1/i4/1047:1051, 1/i4/1067:1071 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_5VYC_245 | 1/i4/1091:1093, 1/i4/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_246 | 1/i4/1098:1101, 1/i4/1131:1134 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_5VYC_247 | 1/i4/1101:1103, 1/i4/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_248 | 1/i4/1108:1110, 1/i4/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_249 | 1/i4/1168:1175, 1/i4/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_250 | 1/i4/1203:1205, 1/i4/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_251 | 1/i4/1206:1208, 1/i4/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_252 | 1/i4/1214:1217, 1/i4/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_253 | 1/i4/1230:1232, 1/i4/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_254 | 1/i4/1235:1236, 1/i4/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_255 | 1/i4/1270:1272, 1/i4/1510:1512 | Isolated non-canonical cWW pair | geometric IL_4M4O_002 IL_01003.3 | |
| IL_5VYC_256 | 1/i4/1272:1324, 1/i4/1504:1510 | No text annotation | ||
| IL_5VYC_257 | 1/i4/1325:1327, 1/i4/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_258 | 1/i4/1329:1333, 1/i4/1498:1500 | Isolated non-canonical cWW pair | geometric IL_5ZTM_001 IL_01003.3 | |
| IL_5VYC_463 | 1/i4/1329:1335, 1/i4/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_259 | 1/i4/1333:1335, 1/i4/1492:1498 | Minor groove platform with extra cWW | homologous IL_4V88_451 NA | |
| IL_5VYC_260 | 1/i4/1336:1338, 1/i4/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_261 | 1/i4/1347:1349, 1/i4/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_262 | 1/i4/1363:1365, 1/i4/1374:1375 | Minor groove platform | homologous IL_4V88_454 NA | |
| IL_5VYC_263 | 1/i4/1536:1539, 1/i4/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_464 | 1/i4/1541:1559, 1/i4/1576:1592 | No text annotation | ||
| IL_5VYC_264 | 1/i4/1560:1562, 1/i4/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_265 | 1/i4/1604:1610, 1/i4/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_266 | 1/i4/1700:1702, 1/i4/1833:1836 | No text annotation | homologous IL_4V88_463 NA | |
| IL_5VYC_465 | 1/i4/1700:1705, 1/i4/1829:1836 | No text annotation | ||
| IL_5VYC_267 | 1/i4/1702:1705, 1/i4/1829:1833 | No text annotation | geometric IL_4V88_464 NA | |
| IL_5VYC_268 | 1/i4/1706:1708, 1/i4/1826:1828 | Isolated non-canonical cWW pair | homologous IL_4V88_465 NA | |
| IL_5VYC_466 | 1/i4/1708:1711, 1/i4/1822:1826 | No text annotation | ||
| IL_5VYC_270 | 1/i4/1713:1716, 1/i4/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_271 | 1/i4/1717:1720, 1/i4/1813:1816 | Double sheared | homologous IL_4V88_468 NA | |
| IL_5VYC_272 | 1/i4/1720:1723, 1/i4/1811:1813 | No text annotation | ||
| IL_5VYC_467 | 1/i4/1729:1731, 1/i4/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_274 | 1/i4/1733:1736, 1/i4/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_275 | 1/i4/1739:1741, 1/i4/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_276 | 1/i4/1742:1746, 1/i4/1788:1792 | Triple sheared | homologous IL_4V88_474 NA | |
| IL_5VYC_277 | 1/i5/23:25, 1/i5/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_278 | 1/i5/34:36, 1/i5/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_279 | 1/i5/37:40, 1/i5/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_280 | 1/i5/41:47, 1/i5/479:481 | No text annotation | geometric IL_4V88_387 NA | |
| IL_5VYC_281 | 1/i5/49:51, 1/i5/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_282 | 1/i5/57:62, 1/i5/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_469 | 1/i5/63:68, 1/i5/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_284 | 1/i5/108:110, 1/i5/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_285 | 1/i5/110:112, 1/i5/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_286 | 1/i5/112:115, 1/i5/348:349 | Multiple bulged bases | geometric IL_4V88_392 NA | |
| IL_5VYC_287 | 1/i5/116:121, 1/i5/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_288 | 1/i5/145:151, 1/i5/167:174 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_5VYC_289 | 1/i5/151:154, 1/i5/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_290 | 1/i5/188:192, 1/i5/207:211 | No text annotation | ||
| IL_5VYC_292 | 1/i5/359:364, 1/i5/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_293 | 1/i5/366:371, 1/i5/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_294 | 1/i5/411:413, 1/i5/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_515 | 1/i5/437:439, 1/i5/454:456 | Isolated cWH basepair | homologous IL_8P9A_394 IL_10892.2 | |
| IL_5VYC_516 | 1/i5/487:489, 1/i5/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_296 | 1/i5/491:495, 1/i5/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_297 | 1/i5/495:496, 1/i5/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_298 | 1/i5/599:608, 1/i5/635:637 | No text annotation | ||
| IL_5VYC_517 | 1/i5/611:617, 1/i5/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_300 | 1/i5/663:665, 1/i5/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_301 | 1/i5/665:671, 1/i5/1161:1162 | No text annotation | homologous IL_4V88_416 NA | |
| IL_5VYC_470 | 1/i5/673:675, 1/i5/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_303 | 1/i5/676:680, 1/i5/1025:1029 | tSH-tHW-tHS | homologous IL_4V88_418 NA | |
| IL_5VYC_518 | 1/i5/802:803, 1/i5/860:863 | No text annotation | homologous IL_8P9A_412 IL_73108.2 | |
| IL_5VYC_304 | 1/i5/805:807, 1/i5/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_471 | 1/i5/805:816, 1/i5/848:858 | No text annotation | ||
| IL_5VYC_305 | 1/i5/807:816, 1/i5/848:856 | No text annotation | ||
| IL_5VYC_306 | 1/i5/922:923, 1/i5/1019:1022 | Major groove platform; stack outside cWW | homologous IL_4V88_428 NA | |
| IL_5VYC_472 | 1/i5/925:926, 1/i5/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_473 | 1/i5/928:931, 1/i5/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_309 | 1/i5/931:935, 1/i5/1007:1010 | Tandem non-canonical cWW pairs | homologous IL_4V88_431 NA | |
| IL_5VYC_519 | 1/i5/942:945, 1/i5/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_311 | 1/i5/952:956, 1/i5/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_312 | 1/i5/1042:1047, 1/i5/1071:1073 | Other IL | homologous IL_4V88_435 NA | |
| IL_5VYC_474 | 1/i5/1042:1051, 1/i5/1067:1073 | No text annotation | ||
| IL_5VYC_313 | 1/i5/1047:1051, 1/i5/1067:1071 | tSH-tHW-tHS | geometric IL_4LFB_033 IL_05821.1 | |
| IL_5VYC_314 | 1/i5/1091:1093, 1/i5/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_315 | 1/i5/1098:1101, 1/i5/1131:1134 | Tandem non-canonical cWW pairs | geometric IL_4V88_438 NA | |
| IL_5VYC_316 | 1/i5/1101:1103, 1/i5/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_317 | 1/i5/1108:1110, 1/i5/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_318 | 1/i5/1168:1175, 1/i5/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_319 | 1/i5/1203:1205, 1/i5/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_320 | 1/i5/1206:1208, 1/i5/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_321 | 1/i5/1214:1217, 1/i5/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_322 | 1/i5/1230:1232, 1/i5/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_323 | 1/i5/1235:1236, 1/i5/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_324 | 1/i5/1270:1272, 1/i5/1510:1512 | Isolated non-canonical cWW pair | geometric IL_4M4O_002 IL_01003.3 | |
| IL_5VYC_325 | 1/i5/1272:1324, 1/i5/1504:1510 | No text annotation | ||
| IL_5VYC_326 | 1/i5/1325:1327, 1/i5/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_327 | 1/i5/1329:1333, 1/i5/1498:1500 | Isolated non-canonical cWW pair | geometric IL_5ZTM_001 IL_01003.3 | |
| IL_5VYC_476 | 1/i5/1329:1335, 1/i5/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_328 | 1/i5/1333:1335, 1/i5/1492:1498 | Minor groove platform with extra cWW | homologous IL_4V88_451 NA | |
| IL_5VYC_329 | 1/i5/1336:1338, 1/i5/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_330 | 1/i5/1347:1349, 1/i5/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_331 | 1/i5/1363:1365, 1/i5/1374:1375 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_5VYC_332 | 1/i5/1536:1539, 1/i5/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_477 | 1/i5/1541:1559, 1/i5/1576:1592 | No text annotation | ||
| IL_5VYC_333 | 1/i5/1560:1562, 1/i5/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_334 | 1/i5/1604:1610, 1/i5/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_335 | 1/i5/1700:1702, 1/i5/1833:1836 | No text annotation | homologous IL_4V88_463 NA | |
| IL_5VYC_478 | 1/i5/1700:1705, 1/i5/1829:1836 | No text annotation | ||
| IL_5VYC_336 | 1/i5/1702:1705, 1/i5/1829:1833 | No text annotation | geometric IL_4V88_464 NA | |
| IL_5VYC_337 | 1/i5/1706:1708, 1/i5/1826:1828 | Isolated non-canonical cWW pair | geometric IL_1U9S_007 IL_01003.3 | |
| IL_5VYC_479 | 1/i5/1708:1711, 1/i5/1822:1826 | No text annotation | ||
| IL_5VYC_339 | 1/i5/1713:1716, 1/i5/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_340 | 1/i5/1717:1720, 1/i5/1813:1816 | Double sheared | geometric IL_4V88_468 NA | |
| IL_5VYC_341 | 1/i5/1720:1723, 1/i5/1811:1813 | No text annotation | ||
| IL_5VYC_480 | 1/i5/1729:1731, 1/i5/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_343 | 1/i5/1733:1736, 1/i5/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_344 | 1/i5/1739:1741, 1/i5/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_345 | 1/i5/1742:1746, 1/i5/1788:1792 | Triple sheared | homologous IL_4V88_474 NA | |
| IL_5VYC_346 | 1/i6/23:25, 1/i6/649:651 | No text annotation | geometric IL_4KR9_002 NA | |
| IL_5VYC_347 | 1/i6/34:36, 1/i6/519:521 | Isolated non-canonical cWW pair | homologous IL_4V88_385 NA | |
| IL_5VYC_348 | 1/i6/37:40, 1/i6/514:518 | Double sheared | geometric IL_4WF9_016 IL_58355.2 | |
| IL_5VYC_349 | 1/i6/41:47, 1/i6/479:481 | No text annotation | geometric IL_4V88_387 NA | |
| IL_5VYC_350 | 1/i6/49:51, 1/i6/476:477 | Minor groove platform | homologous IL_4V88_388 NA | |
| IL_5VYC_351 | 1/i6/57:62, 1/i6/86:88 | No text annotation | homologous IL_4V88_389 NA | |
| IL_5VYC_482 | 1/i6/63:68, 1/i6/81:85 | No text annotation | homologous IL_8P9A_379 IL_21667.2 | |
| IL_5VYC_353 | 1/i6/108:110, 1/i6/351:353 | Isolated non-canonical cWW pair | geometric IL_4TS2_004 IL_71625.3 | |
| IL_5VYC_354 | 1/i6/110:112, 1/i6/349:351 | Isolated cWH basepair | geometric IL_4J50_003 IL_10892.2 | |
| IL_5VYC_355 | 1/i6/112:115, 1/i6/348:349 | Multiple bulged bases | geometric IL_4V88_392 NA | |
| IL_5VYC_356 | 1/i6/116:121, 1/i6/343:347 | No text annotation | homologous IL_4V88_393 NA | |
| IL_5VYC_357 | 1/i6/145:151, 1/i6/167:174 | tWH-tWH-tHW-tHW | homologous IL_4V88_394 NA | |
| IL_5VYC_358 | 1/i6/151:154, 1/i6/164:167 | Tandem non-canonical cWW pairs | geometric IL_4WF9_109 NA | |
| IL_5VYC_359 | 1/i6/188:192, 1/i6/207:211 | No text annotation | ||
| IL_5VYC_361 | 1/i6/359:364, 1/i6/396:403 | Kink-turn with non-sequential stacking | homologous IL_4V88_402 NA | |
| IL_5VYC_362 | 1/i6/366:371, 1/i6/393:394 | No text annotation | geometric IL_5Y58_001 IL_37738.1 | |
| IL_5VYC_363 | 1/i6/411:413, 1/i6/424:429 | No text annotation | homologous IL_4V88_404 NA | |
| IL_5VYC_520 | 1/i6/437:439, 1/i6/454:456 | Isolated cWH basepair | homologous IL_8P9A_394 IL_10892.2 | |
| IL_5VYC_521 | 1/i6/487:489, 1/i6/511:512 | Single bulged U | geometric IL_8C3A_424 NA | |
| IL_5VYC_365 | 1/i6/491:495, 1/i6/508:509 | C-loop | geometric IL_5J7L_018 NA | |
| IL_5VYC_366 | 1/i6/495:496, 1/i6/506:508 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_5VYC_367 | 1/i6/527:531, 1/i6/553:558 | No text annotation | ||
| IL_5VYC_368 | 1/i6/599:608, 1/i6/635:637 | No text annotation | ||
| IL_5VYC_522 | 1/i6/611:617, 1/i6/624:632 | No text annotation | homologous IL_8P9A_404 IL_52042.1 | |
| IL_5VYC_370 | 1/i6/663:665, 1/i6/1162:1164 | Isolated non-canonical cWW pair | geometric IL_4KNQ_003 IL_01003.3 | |
| IL_5VYC_371 | 1/i6/665:671, 1/i6/1161:1162 | No text annotation | geometric IL_4V88_416 NA | |
| IL_5VYC_483 | 1/i6/673:675, 1/i6/1030:1032 | Isolated non-canonical cWW pair | homologous IL_8C3A_427 NA | |
| IL_5VYC_373 | 1/i6/676:680, 1/i6/1025:1029 | tSH-tHW-tHS | geometric IL_4V88_418 NA | |
| IL_5VYC_523 | 1/i6/802:803, 1/i6/860:863 | No text annotation | homologous IL_8P9A_412 IL_73108.2 | |
| IL_5VYC_374 | 1/i6/805:807, 1/i6/856:858 | Isolated non-canonical cWW pair | homologous IL_4V88_424 NA | |
| IL_5VYC_484 | 1/i6/805:816, 1/i6/848:858 | No text annotation | ||
| IL_5VYC_375 | 1/i6/807:816, 1/i6/848:856 | No text annotation | ||
| IL_5VYC_376 | 1/i6/922:923, 1/i6/1019:1022 | Major groove platform; stack outside cWW | geometric IL_4V88_428 NA | |
| IL_5VYC_485 | 1/i6/925:926, 1/i6/1015:1017 | Single bulged U | geometric IL_7KVT_002 IL_97561.3 | |
| IL_5VYC_486 | 1/i6/928:931, 1/i6/1010:1013 | Tandem non-canonical cWW pairs | homologous IL_8P9A_419 IL_15225.2 | |
| IL_5VYC_379 | 1/i6/931:935, 1/i6/1007:1010 | Tandem non-canonical cWW pairs | geometric IL_4V88_431 NA | |
| IL_5VYC_524 | 1/i6/942:945, 1/i6/981:984 | Tandem non-canonical cWW pairs | homologous IL_8P9A_421 IL_15225.2 | |
| IL_5VYC_381 | 1/i6/952:956, 1/i6/967:974 | Kink-turn | homologous IL_4V88_434 NA | |
| IL_5VYC_382 | 1/i6/1042:1047, 1/i6/1071:1073 | Other IL | geometric IL_4V88_435 NA | |
| IL_5VYC_487 | 1/i6/1042:1051, 1/i6/1067:1073 | No text annotation | ||
| IL_5VYC_383 | 1/i6/1047:1051, 1/i6/1067:1071 | tSH-tHW-tHS | homologous IL_4V88_436 NA | |
| IL_5VYC_384 | 1/i6/1091:1093, 1/i6/1152:1158 | No text annotation | homologous IL_4V88_437 NA | |
| IL_5VYC_385 | 1/i6/1098:1101, 1/i6/1131:1134 | Tandem non-canonical cWW pairs | homologous IL_4V88_438 NA | |
| IL_5VYC_386 | 1/i6/1101:1103, 1/i6/1129:1131 | Isolated non-canonical cWW pair | geometric IL_1YZ9_002 IL_01003.3 | |
| IL_5VYC_387 | 1/i6/1108:1110, 1/i6/1123:1124 | Minor groove platform | geometric IL_4LFB_054 IL_34520.3 | |
| IL_5VYC_388 | 1/i6/1168:1175, 1/i6/1186:1191 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_4V88_440 NA | |
| IL_5VYC_389 | 1/i6/1203:1205, 1/i6/1693:1696 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.3 | |
| IL_5VYC_390 | 1/i6/1206:1208, 1/i6/1691:1692 | Single bulged G | homologous IL_4V88_442 NA | |
| IL_5VYC_391 | 1/i6/1214:1217, 1/i6/1681:1685 | C-loop | homologous IL_4V88_443 NA | |
| IL_5VYC_392 | 1/i6/1230:1232, 1/i6/1526:1528 | Isolated non-canonical cWW pair | homologous IL_4V88_444 NA | |
| IL_5VYC_393 | 1/i6/1235:1236, 1/i6/1521:1523 | Minor groove platform | homologous IL_4V88_445 NA | |
| IL_5VYC_394 | 1/i6/1270:1272, 1/i6/1510:1512 | Isolated non-canonical cWW pair | homologous IL_4V88_446 NA | |
| IL_5VYC_395 | 1/i6/1272:1324, 1/i6/1504:1510 | No text annotation | ||
| IL_5VYC_396 | 1/i6/1325:1327, 1/i6/1502:1503 | Single bulged U | homologous IL_4V88_449 NA | |
| IL_5VYC_397 | 1/i6/1329:1333, 1/i6/1498:1500 | Isolated non-canonical cWW pair | geometric IL_5ZTM_001 IL_01003.3 | |
| IL_5VYC_489 | 1/i6/1329:1335, 1/i6/1492:1500 | No text annotation | homologous IL_8P9A_439 IL_99893.1 | |
| IL_5VYC_398 | 1/i6/1333:1335, 1/i6/1492:1498 | Minor groove platform with extra cWW | homologous IL_4V88_451 NA | |
| IL_5VYC_399 | 1/i6/1336:1338, 1/i6/1488:1491 | Isolated non-canonical cWW pair | geometric IL_5TBW_008 NA | |
| IL_5VYC_400 | 1/i6/1347:1349, 1/i6/1380:1382 | Isolated cWH basepair | homologous IL_4V88_453 NA | |
| IL_5VYC_401 | 1/i6/1363:1365, 1/i6/1374:1375 | Minor groove platform | geometric IL_4V88_454 NA | |
| IL_5VYC_402 | 1/i6/1536:1539, 1/i6/1594:1597 | Tandem non-canonical cWW pairs | geometric IL_4K27_001 IL_15225.2 | |
| IL_5VYC_525 | 1/i6/1541:1558, 1/i6/1577:1592 | No text annotation | ||
| IL_5VYC_403 | 1/i6/1560:1562, 1/i6/1573:1575 | Isolated non-canonical cWW pair | geometric IL_5TBW_016 NA | |
| IL_5VYC_404 | 1/i6/1604:1610, 1/i6/1629:1635 | No text annotation | homologous IL_8C3A_469 NA | |
| IL_5VYC_405 | 1/i6/1700:1702, 1/i6/1833:1836 | No text annotation | geometric IL_4V88_463 NA | |
| IL_5VYC_491 | 1/i6/1700:1705, 1/i6/1829:1836 | No text annotation | ||
| IL_5VYC_406 | 1/i6/1702:1705, 1/i6/1829:1833 | No text annotation | homologous IL_4V88_464 NA | |
| IL_5VYC_407 | 1/i6/1706:1708, 1/i6/1826:1828 | Isolated non-canonical cWW pair | geometric IL_1U9S_007 IL_01003.3 | |
| IL_5VYC_492 | 1/i6/1708:1711, 1/i6/1822:1826 | No text annotation | ||
| IL_5VYC_409 | 1/i6/1713:1716, 1/i6/1817:1820 | Tandem non-canonical cWW pairs | geometric IL_5TBW_100 NA | |
| IL_5VYC_410 | 1/i6/1717:1720, 1/i6/1813:1816 | Double sheared | geometric IL_4V88_468 NA | |
| IL_5VYC_411 | 1/i6/1720:1723, 1/i6/1811:1813 | No text annotation | ||
| IL_5VYC_493 | 1/i6/1729:1731, 1/i6/1803:1805 | Isolated non-canonical cWW pair | homologous IL_8C3A_477 NA | |
| IL_5VYC_413 | 1/i6/1733:1736, 1/i6/1798:1801 | Double sheared | homologous IL_4V88_471 NA | |
| IL_5VYC_414 | 1/i6/1739:1741, 1/i6/1793:1795 | Isolated non-canonical cWW pair | geometric IL_4NGF_002 IL_01003.3 | |
| IL_5VYC_415 | 1/i6/1742:1746, 1/i6/1788:1792 | Triple sheared | homologous IL_4V88_474 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_5VYC_416 | Isolated cWH basepair | ||
| IL_5VYC_007 | No text annotation | ||
| IL_5VYC_015 | No text annotation | ||
| IL_5VYC_020 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_024 | No text annotation | ||
| IL_5VYC_027 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_032 | Isolated non-canonical cWW pair | ||
| IL_5VYC_033 | No text annotation | ||
| IL_5VYC_035 | Triple non-canonical cWW pairs | ||
| IL_5VYC_423 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_063 | No text annotation | ||
| IL_5VYC_067 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_429 | Isolated cWH basepair | ||
| IL_5VYC_077 | No text annotation | ||
| IL_5VYC_084 | No text annotation | ||
| IL_5VYC_089 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_093 | No text annotation | ||
| IL_5VYC_096 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_101 | Isolated non-canonical cWW pair | ||
| IL_5VYC_102 | No text annotation | ||
| IL_5VYC_104 | Triple non-canonical cWW pairs | ||
| IL_5VYC_436 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_438 | No text annotation | ||
| IL_5VYC_132 | No text annotation | ||
| IL_5VYC_136 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_442 | Isolated cWH basepair | ||
| IL_5VYC_146 | No text annotation | ||
| IL_5VYC_153 | No text annotation | ||
| IL_5VYC_158 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_162 | No text annotation | ||
| IL_5VYC_165 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_170 | Isolated non-canonical cWW pair | ||
| IL_5VYC_171 | No text annotation | ||
| IL_5VYC_173 | Triple non-canonical cWW pairs | ||
| IL_5VYC_449 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_201 | No text annotation | ||
| IL_5VYC_205 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_455 | Isolated cWH basepair | ||
| IL_5VYC_215 | No text annotation | ||
| IL_5VYC_222 | No text annotation | ||
| IL_5VYC_226 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_230 | No text annotation | ||
| IL_5VYC_233 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_238 | Isolated non-canonical cWW pair | ||
| IL_5VYC_239 | No text annotation | ||
| IL_5VYC_241 | Triple non-canonical cWW pairs | ||
| IL_5VYC_462 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_269 | No text annotation | ||
| IL_5VYC_273 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_468 | Isolated cWH basepair | ||
| IL_5VYC_283 | No text annotation | ||
| IL_5VYC_291 | No text annotation | ||
| IL_5VYC_295 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_299 | No text annotation | ||
| IL_5VYC_302 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_307 | Isolated non-canonical cWW pair | ||
| IL_5VYC_308 | No text annotation | ||
| IL_5VYC_310 | Triple non-canonical cWW pairs | ||
| IL_5VYC_475 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_338 | No text annotation | ||
| IL_5VYC_342 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_481 | Isolated cWH basepair | ||
| IL_5VYC_352 | No text annotation | ||
| IL_5VYC_360 | No text annotation | ||
| IL_5VYC_364 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_369 | No text annotation | ||
| IL_5VYC_372 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_377 | Isolated non-canonical cWW pair | ||
| IL_5VYC_378 | No text annotation | ||
| IL_5VYC_380 | Triple non-canonical cWW pairs | ||
| IL_5VYC_488 | Tandem non-canonical cWW pairs | ||
| IL_5VYC_490 | No text annotation | ||
| IL_5VYC_408 | No text annotation | ||
| IL_5VYC_412 | Tandem non-canonical cWW pairs |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_5VYC_098 | 1/i1/40:41, 1/i1/481:487, 1/i1/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_099 | 1/i1/40:47, 1/i1/479:487, 1/i1/512:514 | No text annotation | homologous J3_8CRE_072 J3_63856.1 | |
| J3_5VYC_002 | 1/i1/682:685, 1/i1/917:922, 1/i1/1022:1023 | No text annotation | ||
| J3_5VYC_050 | 1/i1/682:685, 1/i1/917:923, 1/i1/1019:1023 | No text annotation | ||
| J3_5VYC_051 | 1/i1/816:820, 1/i1/828:831, 1/i1/843:848 | No text annotation | ||
| J3_5VYC_003 | 1/i1/938:941, 1/i1/985:993, 1/i1/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_004 | 1/i1/1094:1096, 1/i1/1136:1140, 1/i1/1147:1151 | No text annotation | ||
| J3_5VYC_052 | 1/i1/1217:1221, 1/i1/1645:1651, 1/i1/1673:1681 | No text annotation | ||
| J3_5VYC_100 | 1/i1/1225:1228, 1/i1/1530:1532, 1/i1/1638:1641 | No text annotation | homologous J3_8CRE_079 J3_44359.1 | |
| J3_5VYC_101 | 1/i1/1237:1244, 1/i1/1255:1324, 1/i1/1504:1520 | No text annotation | ||
| J3_5VYC_102 | 1/i1/1340:1345, 1/i1/1384:1389, 1/i1/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_007 | 1/i1/1350:1351, 1/i1/1360:1363, 1/i1/1375:1379 | No text annotation | homologous J3_8P9A_081 J3_76043.4 | |
| J3_5VYC_103 | 1/i1/1391:1395, 1/i1/1450:1456, 1/i1/1470:1479 | No text annotation | ||
| J3_5VYC_008 | 1/i1/1532:1536, 1/i1/1597:1604, 1/i1/1635:1638 | No text annotation | homologous J3_4V88_041 NA | |
| J3_5VYC_056 | 1/i1/1532:1539, 1/i1/1594:1604, 1/i1/1635:1638 | No text annotation | ||
| J3_5VYC_104 | 1/i2/40:41, 1/i2/481:487, 1/i2/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_105 | 1/i2/40:47, 1/i2/479:487, 1/i2/512:514 | No text annotation | homologous J3_8CRE_072 J3_63856.1 | |
| J3_5VYC_010 | 1/i2/682:685, 1/i2/917:922, 1/i2/1022:1023 | No text annotation | ||
| J3_5VYC_058 | 1/i2/682:685, 1/i2/917:923, 1/i2/1019:1023 | No text annotation | ||
| J3_5VYC_059 | 1/i2/816:820, 1/i2/828:831, 1/i2/843:848 | No text annotation | ||
| J3_5VYC_011 | 1/i2/938:941, 1/i2/985:993, 1/i2/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_012 | 1/i2/1094:1096, 1/i2/1136:1140, 1/i2/1147:1151 | No text annotation | ||
| J3_5VYC_060 | 1/i2/1217:1221, 1/i2/1645:1651, 1/i2/1673:1681 | No text annotation | ||
| J3_5VYC_106 | 1/i2/1225:1228, 1/i2/1530:1532, 1/i2/1638:1641 | No text annotation | homologous J3_8CRE_079 J3_44359.1 | |
| J3_5VYC_107 | 1/i2/1237:1244, 1/i2/1255:1324, 1/i2/1504:1520 | No text annotation | ||
| J3_5VYC_108 | 1/i2/1340:1345, 1/i2/1384:1389, 1/i2/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_015 | 1/i2/1350:1351, 1/i2/1360:1363, 1/i2/1375:1379 | No text annotation | homologous J3_8P9A_081 J3_76043.4 | |
| J3_5VYC_109 | 1/i2/1391:1395, 1/i2/1450:1456, 1/i2/1470:1479 | No text annotation | ||
| J3_5VYC_016 | 1/i2/1532:1536, 1/i2/1597:1604, 1/i2/1635:1638 | No text annotation | homologous J3_4V88_041 NA | |
| J3_5VYC_064 | 1/i2/1532:1539, 1/i2/1594:1604, 1/i2/1635:1638 | No text annotation | ||
| J3_5VYC_110 | 1/i3/40:41, 1/i3/481:487, 1/i3/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_111 | 1/i3/40:47, 1/i3/479:487, 1/i3/512:514 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_5VYC_018 | 1/i3/682:685, 1/i3/917:922, 1/i3/1022:1023 | No text annotation | ||
| J3_5VYC_066 | 1/i3/682:685, 1/i3/917:923, 1/i3/1019:1023 | No text annotation | ||
| J3_5VYC_067 | 1/i3/816:820, 1/i3/828:831, 1/i3/843:848 | No text annotation | ||
| J3_5VYC_019 | 1/i3/938:941, 1/i3/985:993, 1/i3/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_020 | 1/i3/1094:1096, 1/i3/1136:1140, 1/i3/1147:1151 | No text annotation | ||
| J3_5VYC_068 | 1/i3/1217:1221, 1/i3/1645:1651, 1/i3/1673:1681 | No text annotation | ||
| J3_5VYC_112 | 1/i3/1225:1228, 1/i3/1530:1532, 1/i3/1638:1641 | No text annotation | homologous J3_8P9A_077 J3_44359.1 | |
| J3_5VYC_113 | 1/i3/1237:1244, 1/i3/1255:1324, 1/i3/1504:1520 | No text annotation | ||
| J3_5VYC_114 | 1/i3/1340:1345, 1/i3/1384:1389, 1/i3/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_023 | 1/i3/1350:1351, 1/i3/1360:1363, 1/i3/1375:1379 | No text annotation | homologous J3_8P9A_081 J3_76043.4 | |
| J3_5VYC_115 | 1/i3/1391:1395, 1/i3/1450:1456, 1/i3/1470:1479 | No text annotation | ||
| J3_5VYC_024 | 1/i3/1532:1536, 1/i3/1597:1604, 1/i3/1635:1638 | No text annotation | geometric J3_4LFB_009 J3_03192.1 | |
| J3_5VYC_072 | 1/i3/1532:1539, 1/i3/1594:1604, 1/i3/1635:1638 | No text annotation | ||
| J3_5VYC_116 | 1/i4/40:41, 1/i4/481:487, 1/i4/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_117 | 1/i4/40:47, 1/i4/479:487, 1/i4/512:514 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_5VYC_026 | 1/i4/682:685, 1/i4/917:922, 1/i4/1022:1023 | No text annotation | ||
| J3_5VYC_074 | 1/i4/682:685, 1/i4/917:923, 1/i4/1019:1023 | No text annotation | ||
| J3_5VYC_075 | 1/i4/816:820, 1/i4/828:831, 1/i4/843:848 | No text annotation | ||
| J3_5VYC_027 | 1/i4/938:941, 1/i4/985:993, 1/i4/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_028 | 1/i4/1094:1096, 1/i4/1136:1140, 1/i4/1147:1151 | No text annotation | ||
| J3_5VYC_076 | 1/i4/1217:1221, 1/i4/1645:1651, 1/i4/1673:1681 | No text annotation | ||
| J3_5VYC_118 | 1/i4/1225:1228, 1/i4/1530:1532, 1/i4/1638:1641 | No text annotation | homologous J3_8P9A_077 J3_44359.1 | |
| J3_5VYC_119 | 1/i4/1237:1244, 1/i4/1255:1324, 1/i4/1504:1520 | No text annotation | ||
| J3_5VYC_120 | 1/i4/1340:1345, 1/i4/1384:1389, 1/i4/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_031 | 1/i4/1350:1351, 1/i4/1360:1363, 1/i4/1375:1379 | No text annotation | homologous J3_8P9A_081 J3_76043.4 | |
| J3_5VYC_121 | 1/i4/1391:1395, 1/i4/1450:1456, 1/i4/1470:1479 | No text annotation | ||
| J3_5VYC_032 | 1/i4/1532:1536, 1/i4/1597:1604, 1/i4/1635:1638 | No text annotation | homologous J3_4V88_041 NA | |
| J3_5VYC_080 | 1/i4/1532:1539, 1/i4/1594:1604, 1/i4/1635:1638 | No text annotation | ||
| J3_5VYC_122 | 1/i5/40:41, 1/i5/481:487, 1/i5/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_123 | 1/i5/40:47, 1/i5/479:487, 1/i5/512:514 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_5VYC_034 | 1/i5/682:685, 1/i5/917:922, 1/i5/1022:1023 | No text annotation | ||
| J3_5VYC_082 | 1/i5/682:685, 1/i5/917:923, 1/i5/1019:1023 | No text annotation | ||
| J3_5VYC_083 | 1/i5/816:820, 1/i5/828:831, 1/i5/843:848 | No text annotation | ||
| J3_5VYC_035 | 1/i5/938:941, 1/i5/985:993, 1/i5/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_036 | 1/i5/1094:1096, 1/i5/1136:1140, 1/i5/1147:1151 | No text annotation | ||
| J3_5VYC_084 | 1/i5/1217:1221, 1/i5/1645:1651, 1/i5/1673:1681 | No text annotation | ||
| J3_5VYC_124 | 1/i5/1225:1228, 1/i5/1530:1532, 1/i5/1638:1641 | No text annotation | homologous J3_8P9A_077 J3_44359.1 | |
| J3_5VYC_125 | 1/i5/1237:1244, 1/i5/1255:1324, 1/i5/1504:1520 | No text annotation | ||
| J3_5VYC_126 | 1/i5/1340:1345, 1/i5/1384:1389, 1/i5/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_039 | 1/i5/1350:1351, 1/i5/1360:1363, 1/i5/1375:1379 | No text annotation | homologous J3_8P9A_081 J3_76043.4 | |
| J3_5VYC_127 | 1/i5/1391:1395, 1/i5/1450:1456, 1/i5/1470:1479 | No text annotation | ||
| J3_5VYC_040 | 1/i5/1532:1536, 1/i5/1597:1604, 1/i5/1635:1638 | No text annotation | homologous J3_4V88_041 NA | |
| J3_5VYC_088 | 1/i5/1532:1539, 1/i5/1594:1604, 1/i5/1635:1638 | No text annotation | ||
| J3_5VYC_128 | 1/i6/40:41, 1/i6/481:487, 1/i6/512:514 | No text annotation | geometric J3_8P9A_068 J3_58657.1 | |
| J3_5VYC_129 | 1/i6/40:47, 1/i6/479:487, 1/i6/512:514 | No text annotation | homologous J3_8P9A_069 J3_63856.1 | |
| J3_5VYC_042 | 1/i6/682:685, 1/i6/917:922, 1/i6/1022:1023 | No text annotation | ||
| J3_5VYC_090 | 1/i6/682:685, 1/i6/917:923, 1/i6/1019:1023 | No text annotation | ||
| J3_5VYC_091 | 1/i6/816:820, 1/i6/828:831, 1/i6/843:848 | No text annotation | ||
| J3_5VYC_043 | 1/i6/938:941, 1/i6/985:993, 1/i6/1000:1004 | No text annotation | homologous J3_4V88_033 NA | |
| J3_5VYC_044 | 1/i6/1094:1096, 1/i6/1136:1140, 1/i6/1147:1151 | No text annotation | ||
| J3_5VYC_092 | 1/i6/1217:1221, 1/i6/1645:1651, 1/i6/1673:1681 | No text annotation | ||
| J3_5VYC_130 | 1/i6/1225:1228, 1/i6/1530:1532, 1/i6/1638:1641 | No text annotation | homologous J3_8P9A_077 J3_44359.1 | |
| J3_5VYC_131 | 1/i6/1237:1244, 1/i6/1255:1324, 1/i6/1504:1520 | No text annotation | ||
| J3_5VYC_132 | 1/i6/1340:1345, 1/i6/1384:1389, 1/i6/1481:1486 | No text annotation | homologous J3_8P9A_080 J3_17077.1 | |
| J3_5VYC_047 | 1/i6/1350:1351, 1/i6/1360:1363, 1/i6/1375:1379 | No text annotation | geometric J3_8C3A_085 NA | |
| J3_5VYC_095 | 1/i6/1350:1353, 1/i6/1358:1363, 1/i6/1375:1379 | No text annotation | ||
| J3_5VYC_133 | 1/i6/1391:1395, 1/i6/1450:1456, 1/i6/1470:1479 | No text annotation | ||
| J3_5VYC_048 | 1/i6/1532:1536, 1/i6/1597:1604, 1/i6/1635:1638 | No text annotation | geometric J3_4LFB_009 J3_03192.1 | |
| J3_5VYC_097 | 1/i6/1532:1539, 1/i6/1594:1604, 1/i6/1635:1638 | No text annotation | ||
| J4_5VYC_001 | 1/i1/30:34, 1/i1/521:531, 1/i1/553:595, 1/i1/641:644 | No text annotation | ||
| J4_5VYC_002 | 1/i1/53:56, 1/i1/89:96, 1/i1/434:436, 1/i1/457:474 | No text annotation | ||
| J4_5VYC_003 | 1/i1/98:106, 1/i1/355:357, 1/i1/405:409, 1/i1/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_004 | 1/i1/671:673, 1/i1/1032:1037, 1/i1/1078:1089, 1/i1/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_5VYC_005 | 1/i2/30:34, 1/i2/521:531, 1/i2/553:595, 1/i2/641:644 | No text annotation | ||
| J4_5VYC_006 | 1/i2/53:56, 1/i2/89:96, 1/i2/434:436, 1/i2/457:474 | No text annotation | ||
| J4_5VYC_007 | 1/i2/98:106, 1/i2/355:357, 1/i2/405:409, 1/i2/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_008 | 1/i2/671:673, 1/i2/1032:1037, 1/i2/1078:1089, 1/i2/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_5VYC_009 | 1/i3/30:34, 1/i3/521:531, 1/i3/553:595, 1/i3/641:644 | No text annotation | ||
| J4_5VYC_010 | 1/i3/53:56, 1/i3/89:96, 1/i3/434:436, 1/i3/457:474 | No text annotation | ||
| J4_5VYC_011 | 1/i3/98:106, 1/i3/355:357, 1/i3/405:409, 1/i3/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_012 | 1/i3/671:673, 1/i3/1032:1037, 1/i3/1078:1089, 1/i3/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_5VYC_013 | 1/i4/30:34, 1/i4/521:531, 1/i4/553:595, 1/i4/641:644 | No text annotation | ||
| J4_5VYC_014 | 1/i4/53:56, 1/i4/89:96, 1/i4/434:436, 1/i4/457:474 | No text annotation | ||
| J4_5VYC_015 | 1/i4/98:106, 1/i4/355:357, 1/i4/405:409, 1/i4/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_016 | 1/i4/671:673, 1/i4/1032:1037, 1/i4/1078:1089, 1/i4/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_5VYC_017 | 1/i5/30:34, 1/i5/521:531, 1/i5/553:595, 1/i5/641:644 | No text annotation | ||
| J4_5VYC_018 | 1/i5/53:56, 1/i5/89:96, 1/i5/434:436, 1/i5/457:474 | No text annotation | ||
| J4_5VYC_019 | 1/i5/98:106, 1/i5/355:357, 1/i5/405:409, 1/i5/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_020 | 1/i5/671:673, 1/i5/1032:1037, 1/i5/1078:1089, 1/i5/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J4_5VYC_021 | 1/i6/30:34, 1/i6/521:531, 1/i6/553:595, 1/i6/641:644 | No text annotation | ||
| J4_5VYC_022 | 1/i6/53:56, 1/i6/89:96, 1/i6/434:436, 1/i6/457:474 | No text annotation | ||
| J4_5VYC_023 | 1/i6/98:106, 1/i6/355:357, 1/i6/405:409, 1/i6/431:432 | No text annotation | homologous J4_8C3A_021 NA | |
| J4_5VYC_024 | 1/i6/671:673, 1/i6/1032:1037, 1/i6/1078:1089, 1/i6/1160:1161 | No text annotation | homologous J4_8P9A_022 J4_14595.1 | |
| J5_5VYC_007 | 1/i1/123:145, 1/i1/174:186, 1/i1/213:219, 1/i1/302:321, 1/i1/330:341 | No text annotation | ||
| J5_5VYC_002 | 1/i2/123:145, 1/i2/174:192, 1/i2/207:219, 1/i2/302:319, 1/i2/332:341 | No text annotation | ||
| J5_5VYC_003 | 1/i3/123:145, 1/i3/174:192, 1/i3/207:219, 1/i3/302:321, 1/i3/330:341 | No text annotation | ||
| J5_5VYC_004 | 1/i4/123:145, 1/i4/174:192, 1/i4/207:219, 1/i4/302:321, 1/i4/330:341 | No text annotation | ||
| J5_5VYC_005 | 1/i5/123:145, 1/i5/174:187, 1/i5/212:219, 1/i5/302:321, 1/i5/330:341 | No text annotation | ||
| J5_5VYC_008 | 1/i6/123:145, 1/i6/174:187, 1/i6/212:219, 1/i6/302:321, 1/i6/330:341 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_5VYC_001 | No text annotation | ||
| J3_5VYC_049 | No text annotation | ||
| J3_5VYC_053 | No text annotation | ||
| J3_5VYC_005 | No text annotation | ||
| J3_5VYC_054 | No text annotation | ||
| J3_5VYC_006 | No text annotation | ||
| J3_5VYC_055 | No text annotation | ||
| J3_5VYC_009 | No text annotation | ||
| J3_5VYC_057 | No text annotation | ||
| J3_5VYC_061 | No text annotation | ||
| J3_5VYC_013 | No text annotation | ||
| J3_5VYC_062 | No text annotation | ||
| J3_5VYC_014 | No text annotation | ||
| J3_5VYC_063 | No text annotation | ||
| J3_5VYC_017 | No text annotation | ||
| J3_5VYC_065 | No text annotation | ||
| J3_5VYC_069 | No text annotation | ||
| J3_5VYC_021 | No text annotation | ||
| J3_5VYC_070 | No text annotation | ||
| J3_5VYC_022 | No text annotation | ||
| J3_5VYC_071 | No text annotation | ||
| J3_5VYC_025 | No text annotation | ||
| J3_5VYC_073 | No text annotation | ||
| J3_5VYC_077 | No text annotation | ||
| J3_5VYC_029 | No text annotation | ||
| J3_5VYC_078 | No text annotation | ||
| J3_5VYC_030 | No text annotation | ||
| J3_5VYC_079 | No text annotation | ||
| J3_5VYC_033 | No text annotation | ||
| J3_5VYC_081 | No text annotation | ||
| J3_5VYC_085 | No text annotation | ||
| J3_5VYC_037 | No text annotation | ||
| J3_5VYC_086 | No text annotation | ||
| J3_5VYC_038 | No text annotation | ||
| J3_5VYC_087 | No text annotation | ||
| J3_5VYC_041 | No text annotation | ||
| J3_5VYC_089 | No text annotation | ||
| J3_5VYC_093 | No text annotation | ||
| J3_5VYC_045 | No text annotation | ||
| J3_5VYC_094 | No text annotation | ||
| J3_5VYC_046 | No text annotation | ||
| J3_5VYC_096 | No text annotation | ||
| J5_5VYC_001 | No text annotation | ||
| J5_5VYC_006 | No text annotation |
Coloring options: