HL_5VYC_217
3D structure
- PDB id
- 5VYC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6 Å
Loop
- Sequence
- GCUAGAGGUGAAAUUCUUGGACC
- Length
- 23 nucleotides
- Bulged bases
- 5VYC|1|i4|G|970
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VYC|1|i4|G|952
5VYC|1|i4|C|953
5VYC|1|i4|U|954
5VYC|1|i4|A|955
5VYC|1|i4|G|956
5VYC|1|i4|A|957
5VYC|1|i4|G|958
5VYC|1|i4|G|959
5VYC|1|i4|U|960
5VYC|1|i4|G|961
5VYC|1|i4|A|962
5VYC|1|i4|A|963
5VYC|1|i4|A|964
5VYC|1|i4|U|965
5VYC|1|i4|U|966
5VYC|1|i4|C|967
5VYC|1|i4|U|968
5VYC|1|i4|U|969
5VYC|1|i4|G|970
5VYC|1|i4|G|971
5VYC|1|i4|A|972
5VYC|1|i4|C|973
5VYC|1|i4|C|974
Current chains
- Chain i4
- Human 18S ribosomal RNA
Nearby chains
- Chain B4
- 40S ribosomal protein S3a
- Chain F4
- 40S ribosomal protein S5
- Chain I5
- 40S ribosomal protein S8
- Chain L5
- 40S ribosomal protein S11
- Chain O4
- 40S ribosomal protein S14
- Chain k4
- Malignant T-cell-amplified sequence 1
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