HL_5WDT_074

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WDT_074 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.4707

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

5WDT|1|a|C|206
5WDT|1|a|C|207
5WDT|1|a|U|208
5WDT|1|a|U|209
5WDT|1|a|C|210
5WDT|1|a|G|211
5WDT|1|a|G|212
5WDT|1|a|G|213

Current chains

Chain a

16S rRNA

Nearby chains