HL_5WE4_034

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

5WE4|1|A|A|1453, 5WE4|1|A|C|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_034 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1312

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

5WE4|1|A|C|1451
5WE4|1|A|G|1452
5WE4|1|A|A|1453
5WE4|1|A|C|1454
5WE4|1|A|G|1455
5WE4|1|A|G|1456
5WE4|1|A|U|1457
5WE4|1|A|U|1458
5WE4|1|A|G|1459

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17