3D structure

PDB id
5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu wt complex with GppNHp
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CUAAAGAGUAACG
Length
13 nucleotides
Bulged bases
5WE4|1|A|A|2268, 5WE4|1|A|C|2275
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5WE4_052 not in the Motif Atlas
Homologous match to HL_5J7L_187
Geometric discrepancy: 0.0602
The information below is about HL_5J7L_187
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91939.2
Basepair signature
cWW-tSH-tHH-tWW-F-F-F
Number of instances in this motif group
8

Unit IDs

5WE4|1|A|C|2264
5WE4|1|A|U|2265
5WE4|1|A|A|2266
5WE4|1|A|A|2267
5WE4|1|A|A|2268
5WE4|1|A|G|2269
5WE4|1|A|A|2270
5WE4|1|A|G|2271
5WE4|1|A|U|2272
5WE4|1|A|A|2273
5WE4|1|A|A|2274
5WE4|1|A|C|2275
5WE4|1|A|G|2276

Current chains

Chain A
23S rRNA

Nearby chains

Chain M
50S ribosomal protein L16
Chain W
50S ribosomal protein L27

Coloring options:


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