HL_5WE4_077

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_077 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1142

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

5WE4|1|a|A|320
5WE4|1|a|A|321
5WE4|1|a|C|322
5WE4|1|a|U|323
5WE4|1|a|G|324
5WE4|1|a|A|325
5WE4|1|a|G|326
5WE4|1|a|A|327
5WE4|1|a|C|328
5WE4|1|a|A|329
5WE4|1|a|C|330
5WE4|1|a|G|331
5WE4|1|a|G|332
5WE4|1|a|U|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20