HL_5WE6_024

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGUCACGACU

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_024 not in the Motif Atlas

Geometric match to HL_3SKI_003

Geometric discrepancy: 0.2306

The information below is about HL_3SKI_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_14333.1

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

5WE6|1|A|G|882
5WE6|1|A|G|883
5WE6|1|A|U|884
5WE6|1|A|C|885
5WE6|1|A|A|886
5WE6|1|A|C|890
5WE6|1|A|G|891
5WE6|1|A|A|892
5WE6|1|A|C|893
5WE6|1|A|U|894

Current chains

Chain A

23S rRNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain s

30S ribosomal protein S19