HL_5WE6_064

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5WE6|1|A|G|2751, 5WE6|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_064 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1781

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

5WE6|1|A|C|2745
5WE6|1|A|U|2746
5WE6|1|A|G|2747
5WE6|1|A|A|2748
5WE6|1|A|A|2749
5WE6|1|A|A|2750
5WE6|1|A|G|2751
5WE6|1|A|C|2752
5WE6|1|A|A|2753
5WE6|1|A|U|2754
5WE6|1|A|C|2755
5WE6|1|A|U|2756
5WE6|1|A|A|2757
5WE6|1|A|A|2758
5WE6|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13