HL_5WE6_072

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGGAAACG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_072 not in the Motif Atlas

Homologous match to HL_6CZR_215

Geometric discrepancy: 0.329

The information below is about HL_6CZR_215

Detailed Annotation

GNRA with extra near cWW

Broad Annotation

GNRA with extra near cWW

Motif group

HL_82182.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

5WE6|1|a|U|157
5WE6|1|a|G|158
5WE6|1|a|G|159
5WE6|1|a|A|160
5WE6|1|a|A|161
5WE6|1|a|A|162
5WE6|1|a|C|163
5WE6|1|a|G|164

Current chains

Chain a

16S rRNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain t

30S ribosomal protein S20