HL_5WE6_077

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_077 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1052

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

5WE6|1|a|A|320
5WE6|1|a|A|321
5WE6|1|a|C|322
5WE6|1|a|U|323
5WE6|1|a|G|324
5WE6|1|a|A|325
5WE6|1|a|G|326
5WE6|1|a|A|327
5WE6|1|a|C|328
5WE6|1|a|A|329
5WE6|1|a|C|330
5WE6|1|a|G|331
5WE6|1|a|G|332
5WE6|1|a|U|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20