HL_5WE6_087

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

5WE6|1|a|U|842, 5WE6|1|a|G|844, 5WE6|1|a|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_087 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3967

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

5WE6|1|a|C|840
5WE6|1|a|C|841
5WE6|1|a|U|842
5WE6|1|a|U|843
5WE6|1|a|G|844
5WE6|1|a|A|845
5WE6|1|a|G|846

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S18