HL_5WF0_028

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACGCUUAUGCGU

Length

12 nucleotides

Bulged bases

5WF0|1|A|A|1175, 5WF0|1|A|G|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_028 not in the Motif Atlas

Homologous match to HL_5J7L_213

Geometric discrepancy: 0.4366

The information below is about HL_5J7L_213

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90774.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

5WF0|1|A|A|1169
5WF0|1|A|C|1170
5WF0|1|A|G|1171
5WF0|1|A|C|1172
5WF0|1|A|U|1173
5WF0|1|A|U|1174
5WF0|1|A|A|1175
5WF0|1|A|U|1176
5WF0|1|A|G|1177
5WF0|1|A|C|1178
5WF0|1|A|G|1179
5WF0|1|A|U|1180

Current chains

Chain A

23S rRNA

Nearby chains