HL_5WF0_034

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGACGGUUG

Length

9 nucleotides

Bulged bases

5WF0|1|A|G|1452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_034 not in the Motif Atlas

Homologous match to HL_5J7L_169

Geometric discrepancy: 0.2567

The information below is about HL_5J7L_169

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_22622.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

5WF0|1|A|C|1451
5WF0|1|A|G|1452
5WF0|1|A|A|1453
5WF0|1|A|C|1454
5WF0|1|A|G|1455
5WF0|1|A|G|1456
5WF0|1|A|U|1457
5WF0|1|A|U|1458
5WF0|1|A|G|1459

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17