HL_5WF0_051

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

5WF0|1|A|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_051 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0868

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

5WF0|1|A|C|2248
5WF0|1|A|U|2249
5WF0|1|A|G|2250
5WF0|1|A|OMG|2251
5WF0|1|A|G|2252
5WF0|1|A|G|2253
5WF0|1|A|C|2254
5WF0|1|A|G|2255
5WF0|1|A|G|2256

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27

Chain v

Transfer RNA; tRNA