HL_5WF0_116
3D structure
- PDB id
- 5WF0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- A(PSU)UGAA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WF0_116 not in the Motif Atlas
- Homologous match to HL_5J8B_118
- Geometric discrepancy: 0.3085
- The information below is about HL_5J8B_118
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 54
Unit IDs
5WF0|1|y|A|31
5WF0|1|y|PSU|32
5WF0|1|y|U|33
5WF0|1|y|G|34
5WF0|1|y|A|35
5WF0|1|y|A|36
5WF0|1|y|MIA|37
5WF0|1|y|A|38
5WF0|1|y|PSU|39
Current chains
- Chain y
- Phe-tRNA-Phe
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain x
- mRNA
Coloring options: