HL_5WFK_028

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACGCUUAUGCGU

Length

12 nucleotides

Bulged bases

5WFK|1|A|A|1175, 5WFK|1|A|G|1179

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFK_028 not in the Motif Atlas

Homologous match to HL_5J7L_213

Geometric discrepancy: 0.4424

The information below is about HL_5J7L_213

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90774.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

5WFK|1|A|A|1169
5WFK|1|A|C|1170
5WFK|1|A|G|1171
5WFK|1|A|C|1172
5WFK|1|A|U|1173
5WFK|1|A|U|1174
5WFK|1|A|A|1175
5WFK|1|A|U|1176
5WFK|1|A|G|1177
5WFK|1|A|C|1178
5WFK|1|A|G|1179
5WFK|1|A|U|1180

Current chains

Chain A

23S rRNA

Nearby chains