HL_5WFS_022

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

5WFS|1|A|A|781, 5WFS|1|A|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFS_022 not in the Motif Atlas

Geometric match to HL_2NUE_001

Geometric discrepancy: 0.3285

The information below is about HL_2NUE_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

5WFS|1|A|U|779
5WFS|1|A|G|780
5WFS|1|A|A|781
5WFS|1|A|A|782
5WFS|1|A|A|783
5WFS|1|A|G|784
5WFS|1|A|G|785

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2