HL_5WFS_064

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

5WFS|1|A|G|2751, 5WFS|1|A|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFS_064 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.146

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

5WFS|1|A|C|2745
5WFS|1|A|U|2746
5WFS|1|A|G|2747
5WFS|1|A|A|2748
5WFS|1|A|A|2749
5WFS|1|A|A|2750
5WFS|1|A|G|2751
5WFS|1|A|C|2752
5WFS|1|A|A|2753
5WFS|1|A|U|2754
5WFS|1|A|C|2755
5WFS|1|A|U|2756
5WFS|1|A|A|2757
5WFS|1|A|A|2758
5WFS|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36 1

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13