HL_5WFS_079

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GCGCAAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFS_079 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3261

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

5WFS|1|a|G|378
5WFS|1|a|C|379
5WFS|1|a|G|380
5WFS|1|a|C|381
5WFS|1|a|A|382
5WFS|1|a|A|383
5WFS|1|a|G|384
5WFS|1|a|C|385

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16