HL_5WIT_061
3D structure
- PDB id
- 5WIT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- C(2MU)GUUCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 2MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WIT_061 not in the Motif Atlas
- Homologous match to HL_7RQB_062
- Geometric discrepancy: 0.0641
- The information below is about HL_7RQB_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WIT|1|1A|C|2563
5WIT|1|1A|2MU|2564
5WIT|1|1A|G|2565
5WIT|1|1A|U|2566
5WIT|1|1A|U|2567
5WIT|1|1A|C|2568
5WIT|1|1A|G|2569
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1w
- Transfer RNA; tRNA
Coloring options: