HL_5WLC_025
3D structure
- PDB id
- 5WLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAAACUUAAA
- Length
- 11 nucleotides
- Bulged bases
- 5WLC|1|L1|A|1131, 5WLC|1|L1|U|1135
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WLC_025 not in the Motif Atlas
- Geometric match to HL_3IGI_004
- Geometric discrepancy: 0.2932
- The information below is about HL_3IGI_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37569.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5WLC|1|L1|U|1129
5WLC|1|L1|G|1130
5WLC|1|L1|A|1131
5WLC|1|L1|A|1132
5WLC|1|L1|A|1133
5WLC|1|L1|C|1134
5WLC|1|L1|U|1135
5WLC|1|L1|U|1136
5WLC|1|L1|A|1137
5WLC|1|L1|A|1138
5WLC|1|L1|A|1139
Current chains
- Chain L1
- 18S pre-rRNA
Nearby chains
- Chain LQ
- Utp12
- Chain NE
- Faf1
- Chain SH
- Rcl1
- Chain SM
- Imp4
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