HL_5WWT_003
3D structure
- PDB id
- 5WWT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of human NSun6/tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CAGGGGUAG
- Length
- 9 nucleotides
- Bulged bases
- 5WWT|1|D|G|18, 5WWT|1|D|G|19, 5WWT|1|D|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WWT_003 not in the Motif Atlas
- Homologous match to HL_5WWT_001
- Geometric discrepancy: 0.0282
- The information below is about HL_5WWT_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_45175.1
- Basepair signature
- cWW-cWS-F-F
- Number of instances in this motif group
- 5
Unit IDs
5WWT|1|D|C|13
5WWT|1|D|A|14
5WWT|1|D|G|15
5WWT|1|D|G|16
5WWT|1|D|G|18
5WWT|1|D|G|19
5WWT|1|D|U|20
5WWT|1|D|A|21
5WWT|1|D|G|22
Current chains
- Chain D
- tRNA
Nearby chains
- Chain B
- Putative methyltransferase NSUN6
Coloring options: