HL_5X2G_002
3D structure
- PDB id
- 5X2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Campylobacter jejuni Cas9 in complex with sgRNA and target DNA (AGAAACC PAM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUUGCGGGAC
- Length
- 11 nucleotides
- Bulged bases
- 5X2G|1|B|A|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41543.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5X2G|1|B|G|54
5X2G|1|B|U|55
5X2G|1|B|U|56
5X2G|1|B|U|57
5X2G|1|B|G|58
5X2G|1|B|C|59
5X2G|1|B|G|60
5X2G|1|B|G|61
5X2G|1|B|G|62
5X2G|1|B|A|63
5X2G|1|B|C|64
Current chains
- Chain B
- sgRNA
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9
Coloring options: