HL_5ZEP_086

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEP_086 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1606

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5ZEP|1|a|C|454
5ZEP|1|a|G|455
5ZEP|1|a|C|456
5ZEP|1|a|A|457
5ZEP|1|a|A|458
5ZEP|1|a|G|459

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16