HL_5ZET_051

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

5ZET|1|A|A|2137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZET_051 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1966

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

5ZET|1|A|G|2134
5ZET|1|A|U|2135
5ZET|1|A|A|2136
5ZET|1|A|A|2137
5ZET|1|A|C|2138
5ZET|1|A|U|2139
5ZET|1|A|A|2140
5ZET|1|A|U|2141
5ZET|1|A|A|2142
5ZET|1|A|A|2143
5ZET|1|A|C|2144

Current chains

Chain A

23S rRNA

Nearby chains