HL_5ZET_074
3D structure
- PDB id
- 5ZET (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCCUUCCG
- Length
- 8 nucleotides
- Bulged bases
- 5ZET|1|B|U|87
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZET_074 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3327
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51020.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 11
Unit IDs
5ZET|1|B|C|83
5ZET|1|B|C|84
5ZET|1|B|C|85
5ZET|1|B|U|86
5ZET|1|B|U|87
5ZET|1|B|C|88
5ZET|1|B|C|89
5ZET|1|B|G|90
Current chains
- Chain B
- P-tRNAfMet
Nearby chains
- Chain 1
- 50S ribosomal protein L30
- Chain 8
- Uncharacterized protein bL37
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L25
Coloring options: