HL_5ZEU_014

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCUUAAC

Length

7 nucleotides

Bulged bases

5ZEU|1|a|U|599

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEU_014 not in the Motif Atlas

Homologous match to HL_5J7L_014

Geometric discrepancy: 0.0808

The information below is about HL_5J7L_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

5ZEU|1|a|G|597
5ZEU|1|a|C|598
5ZEU|1|a|U|599
5ZEU|1|a|U|600
5ZEU|1|a|A|601
5ZEU|1|a|A|602
5ZEU|1|a|C|603

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16