HL_5ZEU_016

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEU_016 not in the Motif Atlas

Homologous match to HL_5J7L_016

Geometric discrepancy: 0.0871

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

5ZEU|1|a|C|706
5ZEU|1|a|G|707
5ZEU|1|a|A|708
5ZEU|1|a|A|709
5ZEU|1|a|G|710
5ZEU|1|a|G|711

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S15