HL_5ZEU_028

3D structure

PDB id

5ZEU (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 30S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEU_028 not in the Motif Atlas

Homologous match to HL_4LFB_028

Geometric discrepancy: 0.1627

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

5ZEU|1|a|C|1246
5ZEU|1|a|G|1247
5ZEU|1|a|U|1248
5ZEU|1|a|G|1249
5ZEU|1|a|A|1250
5ZEU|1|a|G|1251

Current chains

Chain a

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S13

Chain s

30S ribosomal protein S19