HL_5ZLU_006

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_006 not in the Motif Atlas

Geometric match to HL_5TBW_019

Geometric discrepancy: 0.1646

The information below is about HL_5TBW_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

5ZLU|1|G|G|158
5ZLU|1|G|G|159
5ZLU|1|G|A|160
5ZLU|1|G|A|161
5ZLU|1|G|A|162
5ZLU|1|G|C|163

Current chains

Chain G

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S20