HL_5ZLU_038

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

5ZLU|1|V|G|125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_038 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.2168

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

5ZLU|1|V|G|123
5ZLU|1|V|G|124
5ZLU|1|V|G|125
5ZLU|1|V|A|126
5ZLU|1|V|A|127
5ZLU|1|V|C|128

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain q

50S ribosomal protein L23

Chain z

50S ribosomal protein L34