HL_5ZLU_048

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

5ZLU|1|V|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_048 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.458

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

5ZLU|1|V|G|382
5ZLU|1|V|U|383
5ZLU|1|V|U|384
5ZLU|1|V|C|385
5ZLU|1|V|G|386
5ZLU|1|V|U|387
5ZLU|1|V|G|388
5ZLU|1|V|G|389
5ZLU|1|V|A|390
5ZLU|1|V|G|391
5ZLU|1|V|C|392

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L15

Chain w

50S ribosomal protein L31