HL_5ZLU_049

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_049 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.3838

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

5ZLU|1|V|G|410
5ZLU|1|V|G|411
5ZLU|1|V|A|412
5ZLU|1|V|C|413
5ZLU|1|V|C|414
5ZLU|1|V|A|415
5ZLU|1|V|C|416
5ZLU|1|V|C|417

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain i

50S ribosomal protein L15